>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB; InterPro: IPR013363 Proteins in this entry are the DotB component of Dot/Icm secretion systems, as found in the obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii. While this system resembles type IV secretion systems and has been called a form of type IV, the literature now seems to favor calling this the Dot/Icm system. This family is most closely related to the TraJ proteins of plasmid transfer (IPR013364 from INTERPRO), rather than to proteins of other type IV secretion systems..

Probab=99.90 E-value=5.1e-23 Score=179.44 Aligned_cols=254 Identities=24% Similarity=0.345 Sum_probs=194.9 Q ss_pred CCCCEEEEECCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHC-------CCCC---CCCCEEEEEECCCCEEEEE Q ss_conf 33217998569918998278389717620798999999999999809-------8124---3387787982376203453 Q gi|254780724|r 134 DDIADIMVNGSNKVFIEVNGKTVETGINFRDNEQLLSVCQRIVNQVG-------RRVD---ESSPICDARLLDGSRVNVI 203 (483) Q Consensus 134 ~~VsdI~ing~~~I~ve~~G~~~~~~~~f~~~~~l~~~i~rla~~~g-------~~i~---~~~P~~d~~lpdg~Ri~~~ 203 (483) T Consensus 16 l~asditiqtG~~~~aevyGrl~~~t~r~lsn~e~~dl~n~iyGPn~ttq~~~G~didthye~rPnr~~r~--ryr~n~t 93 (358) T TIGR02524 16 LNASDITIQTGRAVLAEVYGRLLKLTRRRLSNAELSDLLNAIYGPNATTQLLRGKDIDTHYEIRPNRNVRY--RYRVNAT 93 (358) T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE--EEEEECE T ss_conf 17430242245157789878999876444312247778875218752112320452221000046777504--6787040 Q ss_pred CCCC-CCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC----CCCC Q ss_conf 1553-5788168884057654667888650699889999989862258848998188888889999998303----8767 Q gi|254780724|r 204 IPPL-ALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYI----DKDE 278 (483) Q Consensus 204 ~~p~-s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i----~~~~ 278 (483) T Consensus 94 ~C~v~Gh~~iqit~r~iP~~PP~ls~~~l----P---~~i~~aiaPqeG~v~~tGatGsGkstlla~iirel~e~~ds~r 166 (358) T TIGR02524 94 ACLVEGHEAIQITLRAIPAEPPKLSKLDL----P---DAIVEAIAPQEGVVYVTGATGSGKSTLLAAIIRELIEASDSNR 166 (358) T ss_pred EEEEECCCCEEEEEEECCCCCCCCCCCCC----H---HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC T ss_conf 44520555047787642798874431134----1---7999851788866998626776368899999999860676564 Q ss_pred CEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHH-HHHHHHCCCCEEEHHH Q ss_conf 679996421312567875677874166665300018999987520599889965758799999-9999873970102000 Q gi|254780724|r 279 RIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVLD-LLQAMNTGHDGSMGTI 357 (483) Q Consensus 279 rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~IiVGEiRg~Ea~~-~l~A~~TGH~G~ltTl 357 (483) T Consensus 167 k~ltye~Pie~vyd~~~t~~a~v~qsei-Prhl~~fa~GvrnalrrkP~~i~vGe~rd~etisa~leaaltGhP-vyttl 244 (358) T TIGR02524 167 KVLTYEAPIEYVYDELETISAVVSQSEI-PRHLNSFADGVRNALRRKPRLILVGEARDAETISAVLEAALTGHP-VYTTL 244 (358) T ss_pred EEEEECCCHHHHHHCCCCCEEEEEHHHC-CHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCC-CEEEC T ss_conf 1464226323322110100112220002-122567888888875228856898336441579999988743884-00100 Q ss_pred CCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHCCEEEEEEECC Q ss_conf 4788888999999755304-679998999999974235889998769 Q gi|254780724|r 358 HANNARESFGRMEAMIAMG-GFTLPSQMVREIITSSLDVIVQTQRLR 403 (483) Q Consensus 358 Ha~s~~~ai~RL~~m~~~~-~~~~~~~~~~~~ia~avd~iV~~~r~~ 403 (483) T Consensus 245 h~sGvaet~rrlv~sf~~eer~Grtid-----i~et~rl~iWq~lvP 286 (358) T TIGR02524 245 HSSGVAETIRRLVTSFSAEERLGRTID-----ILETLRLIIWQKLVP 286 (358) T ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHH-----HHHHHHHHHHHHHCC T ss_conf 000268999998622552100121678-----999999998763145

HHsearch alignment for GI: 254780724 and conserved domain: TIGR02524