>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB; InterPro: IPR013374 This model describes a protein involved in type IV pilus biogenesis designated PilB in Pseudomonas aeruginosa but PilF in Neisseria gonorrhoeae; the more common usage, reflected here, is PilB. This protein is an ATPase involved in protein export for pilin assembly, and is closely related to GspE (IPR013369 from INTERPRO) of type II secretion systems (also referred to as the main terminal branch of the general secretion pathway). Note that type IV pilus systems are often divided into type IV-A and IV-B, with the latter group including bundle-forming pilus, mannose-sensitive hemagglutinin, etc. Members of this family are found in type IV-A systems.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0009297 pilus biogenesis.

Probab=100.00 E-value=0 Score=415.20 Aligned_cols=260 Identities=24% Similarity=0.319 Sum_probs=222.0 Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEECCC---CEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHCCCC Q ss_conf 678999999999988565633588588332179985699---18998278389717620798999999999999809812 Q gi|254780724|r 107 LDEQLDLFEDLCNDILGYGPLQPLIARDDIADIMVNGSN---KVFIEVNGKTVETGINFRDNEQLLSVCQRIVNQVGRRV 183 (483) Q Consensus 107 ~~~~~~l~~~i~~e~~glGpL~~ll~D~~VsdI~ing~~---~I~ve~~G~~~~~~~~f~~~~~l~~~i~rla~~~g~~i 183 (483) T Consensus 188 DAPvvKFvN~iL~DAir~G----------ASDIHFEPYE~~yRvRyR~DG~L~Eva~PP~--~l~~ri~aRiKvMS~LDI 255 (577) T TIGR02538 188 DAPVVKFVNKILLDAIRKG----------ASDIHFEPYEKKYRVRYRIDGVLHEVAQPPL--KLANRIAARIKVMSRLDI 255 (577) T ss_pred CCCCHHHHHHHHHHHHHCC----------CCCCCCCCCCCCCEEEEEECCEEHHHHCCCH--HHHHHHHHHHHHHHCCCC T ss_conf 8870133878799998468----------8612113676872067511673164325858--899999989999732671 Q ss_pred CCCCCEEEEEECC--------CCEEEEECCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE Q ss_conf 4338778798237--------62034531553578816888405765466788865069988999998986225884899 Q gi|254780724|r 184 DESSPICDARLLD--------GSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGARLLQIIGRIRCNVLI 255 (483) Q Consensus 184 ~~~~P~~d~~lpd--------g~Ri~~~~~p~s~~G~~i~IRk~~~~~~~l~~l~~~g~~~~~~~~~l~~~v~~~~nilV 255 (483) T Consensus 256 aEkR~PQDGRiKl~~sk~k~iDFRVStL---PTLfGEKvVLRiLDsS~a~L-di~~LGFeP~Qk~~fL~Ai~kPqGMvLV 331 (577) T TIGR02538 256 AEKRIPQDGRIKLKLSKSKAIDFRVSTL---PTLFGEKVVLRILDSSAAKL-DIDKLGFEPDQKALFLEAIHKPQGMVLV 331 (577) T ss_pred CCCCCCCCCCEEEEECCCEEEEEEECCC---CCCCCCEEEEEEECHHHCCC-CCHHHCCCHHHHHHHHHHHHCCCCCEEE T ss_conf 2245687873677537844551253787---42024446677655221226-7422068888999999997079972886 Q ss_pred ECCCCCCHHHHHHHHHHH-CCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEECCC Q ss_conf 818888888999999830-3876767999642131256787567787416666530001899998752059988996575 Q gi|254780724|r 256 SGGTGSGKTTLLNCLTRY-IDKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEV 334 (483) Q Consensus 256 sG~TGSGKTT~L~al~~~-i~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~IiVGEi 334 (483) T Consensus 332 TGPTGSGKTVSLYTaLniLN~~~~NISTAEDPVEINLpGINQVn-------vNpK~GLTFAaALrSFLRQDPDIIMVGEI 404 (577) T TIGR02538 332 TGPTGSGKTVSLYTALNILNTEEVNISTAEDPVEINLPGINQVN-------VNPKIGLTFAAALRSFLRQDPDIIMVGEI 404 (577) T ss_pred ECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEC-------CCCCCCCCHHHHHHHHCCCCCCEEEEECC T ss_conf 26659841687876311257767450114477246407715120-------46678878799998640689988987066 Q ss_pred CCHHHHH-HHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEEE Q ss_conf 8799999-99998739701020004788888999999755304679998999999974235889998 Q gi|254780724|r 335 RGPEVLD-LLQAMNTGHDGSMGTIHANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQ 400 (483) Q Consensus 335 Rg~Ea~~-~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m~~~~~~~~~~~~~~~~ia~avd~iV~~~ 400 (483) T Consensus 405 RDLETAEIAiKAAqTGHL-VlSTLHTNdAp~Tl~RL~NM------Giap----FNIASSV~LI~AQR 460 (577) T TIGR02538 405 RDLETAEIAIKAAQTGHL-VLSTLHTNDAPETLARLVNM------GIAP----FNIASSVNLIMAQR 460 (577) T ss_pred CCHHHHHHHHHHHCCCCC-EECCCCCCCHHHHHHHHHHC------CCHH----HHHHHHHHHHHHHH T ss_conf 642158999998404872-10100016858999999753------8413----79999999999997

HHsearch alignment for GI: 254780724 and conserved domain: TIGR02538