HHsearch alignment for GI: 254780724 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..

Probab=96.71  E-value=0.0054  Score=39.52  Aligned_cols=48  Identities=33%  Similarity=0.439  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHC-CCC--CEEEECCCCCCHHHHHHHHHHHCC-----CCCC-EEEEE
Q ss_conf             899999898622-588--489981888888899999983038-----7676-79996
Q gi|254780724|r  237 AEGARLLQIIGR-IRC--NVLISGGTGSGKTTLLNCLTRYID-----KDER-IVTCE  284 (483)
Q Consensus       237 ~~~~~~l~~~v~-~~~--nilVsG~TGSGKTT~L~al~~~i~-----~~~r-ivtIE  284 (483)
T Consensus        27 ~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~   83 (383)
T TIGR02928        27 EELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVY   83 (383)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             999999887506748987258878889878899999999999986226997158999