HHsearch alignment for GI: 254780724 and conserved domain: TIGR03346

>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins.
Probab=97.84  E-value=2.3e-05  Score=56.07  Aligned_cols=101  Identities=24%  Similarity=0.380  Sum_probs=68.2

Q ss_pred             HCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf             22588489981888888899999983038767679996421312567875677874166665300018999987520599
Q gi|254780724|r  247 GRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRP  326 (483)
Q Consensus       247 v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~P  326 (483)
T Consensus       592 ~rP~GsFlf~GptGvGKTELAKaLAe~Lfg~~~~LIriDMSEy~E~hsvsrLiGaPPGYV----Gy~egG~Lte~vr~~P  667 (852)
T TIGR03346       592 NRPIGSFLFLGPTGVGKTELAKALAEFLFDDEDAMVRIDMSEYMEKHSVARLIGAPPGYV----GYEEGGQLTEAVRRKP  667 (852)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHCCHHHHHHHCCCCCCCC----CCCCCCEECHHHHHCC
T ss_conf             997458998678877689999999999855852069843044301224778558999767----7687874239898198


Q ss_pred             -CEEEECCCC--CHHHHHH-HHHHHCCCC
Q ss_conf             -889965758--7999999-999873970
Q gi|254780724|r  327 -ERIILGEVR--GPEVLDL-LQAMNTGHD  351 (483)
Q Consensus       327 -D~IiVGEiR--g~Ea~~~-l~A~~TGH~  351 (483)
T Consensus       668 ysVvL~DEIEKAh~~V~~~lLQilD~G~l  696 (852)
T TIGR03346       668 YSVVLFDEVEKAHPDVFNVLLQVLDDGRL  696 (852)
T ss_pred             CEEEEECCHHHHCHHHHHHHHHHHCCCEE
T ss_conf             87998530543076899999988236743