HHsearch alignment for GI: 254780724 and conserved domain: TIGR03410
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=96.91 E-value=0.0013 Score=43.82 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=49.8
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCC----CCEEEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 98622588489981888888899999983038767679996421312567----87567787416666530001899998
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQ----PHVVRLETRPPNIEGEGEITMRDLVK 319 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El~l~~----~~~v~~~~~~~~~e~~~~~t~~~ll~ 319 (483)
T Consensus 20 s~~v~~Gei~~liGpNGaGKSTL~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~gig~v~Q~~~--lf~~lTV~Enl~ 97 (230)
T TIGR03410 20 SLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYVPQGRE--IFPRLTVEENLL 97 (230)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHCCEEEECCCCC--CCCCCCHHHHHH
T ss_conf 779999979999999994099999999779999954999999999999989999829599377742--576788999999
Q ss_pred HHHHCCC
Q ss_conf 7520599
Q gi|254780724|r 320 NCLRMRP 326 (483)
Q Consensus 320 ~aLR~~P 326 (483)
T Consensus 98 ~~~~~~~ 104 (230)
T TIGR03410 98 TGLAALP 104 (230)
T ss_pred HHHHHCC
T ss_conf 9998749