HHsearch alignment for GI: 254780724 and conserved domain: TIGR03415
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=97.13 E-value=0.00068 Score=45.83 Aligned_cols=67 Identities=19% Similarity=0.140 Sum_probs=49.1
Q ss_pred CCCCCCCHHHHHHCCCCCHHHHHH---------HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 576546678886506998899999---------8986225884899818888888999999830387676799964
Q gi|254780724|r 219 FKKDKLTLDHLVSFGAVTAEGARL---------LQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 219 ~~~~~~~l~~l~~~g~~~~~~~~~---------l~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 10 FG~~~~~a~~~~~~g~~k~~i~~~tg~~vAV~dvsl~I~~GEi~~lvGpSGsGKSTLLr~i~GL~~pt~G~I~i~~ 85 (382)
T TIGR03415 10 FGDQPAEALALLDQGKTREEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKD 85 (382)
T ss_pred CCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf 2899899999998799989998833999989651748879989999999973499999999759998852999926