HHsearch alignment for GI: 254780724 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=97.36 E-value=0.00058 Score=46.29 Aligned_cols=43 Identities=26% Similarity=0.197 Sum_probs=35.9
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 9862258848998188888889999998303876767999642
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDT 286 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~ 286 (483)
T Consensus 20 s~~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~sG~i~~~g~ 62 (201)
T cd03231 20 SFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGG 62 (201)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf 7888799599999999999999999996677888529999999