HHsearch alignment for GI: 254780724 and conserved domain: cd03233

>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.60  E-value=0.00017  Score=50.02  Aligned_cols=93  Identities=19%  Similarity=0.212  Sum_probs=50.1

Q ss_pred             HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCC---CEEEEE--CCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHH
Q ss_conf             98622588489981888888899999983038767---679996--4213125678756778741666653000189999
Q gi|254780724|r  244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDE---RIVTCE--DTAELQLQQPHVVRLETRPPNIEGEGEITMRDLV  318 (483)
Q Consensus       244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~---rivtIE--D~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll  318 (483)
T Consensus        27 s~~i~~Gei~~llG~nGsGKSTLl~~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~v~--q~~~~~~~ltv~e~l  104 (202)
T cd03233          27 SGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFAEKYPGEIIYVS--EEDVHFPTLTVRETL  104 (202)
T ss_pred             EEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCEECCHHHHHHHCCEEEEC--CCCCCCCCCCHHHHH
T ss_conf             889809849999989999889999998378789875137999999994051486420199986--732237688099999


Q ss_pred             HHHHHCCCCEEEECCCCCHHH
Q ss_conf             875205998899657587999
Q gi|254780724|r  319 KNCLRMRPERIILGEVRGPEV  339 (483)
Q Consensus       319 ~~aLR~~PD~IiVGEiRg~Ea  339 (483)
T Consensus       105 ~~~~~~~~~~~~-~~LSgGqk  124 (202)
T cd03233         105 DFALRCKGNEFV-RGISGGER  124 (202)
T ss_pred             HHHHHHCCCCCC-CCCCHHHH
T ss_conf             999984658744-45899999