HHsearch alignment for GI: 254780724 and conserved domain: cd03268
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=96.60 E-value=0.0034 Score=40.98 Aligned_cols=42 Identities=21% Similarity=0.217 Sum_probs=35.5
Q ss_pred HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf 986225884899818888888999999830387676799964
Q gi|254780724|r 244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED 285 (483)
Q Consensus 244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED 285 (483)
T Consensus 20 s~~v~~Gei~gllG~NGaGKSTLl~~i~Gl~~p~~G~i~i~G 61 (208)
T cd03268 20 SLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDG 61 (208)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 668869819999999999999999999578378989999999