>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.75  E-value=0.0066  Score=38.94  Aligned_cols=43  Identities=21%  Similarity=0.138  Sum_probs=36.2

Q ss_pred             HHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             9862258848998188888889999998303876767999642
Q gi|254780724|r  244 QIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDT  286 (483)
Q Consensus       244 ~~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~  286 (483)
T Consensus        20 s~~v~~Gei~gllG~NGaGKTTll~~i~Gl~~p~~G~i~i~G~   62 (210)
T cd03269          20 SFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGK   62 (210)
T ss_pred             EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf             6788799599999899984999999996002668998999998