>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.00  E-value=0.00099  Score=44.70  Aligned_cols=41  Identities=27%  Similarity=0.268  Sum_probs=34.7

Q ss_pred             HHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEC
Q ss_conf             86225884899818888888999999830387676799964
Q gi|254780724|r  245 IIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCED  285 (483)
Q Consensus       245 ~~v~~~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED  285 (483)
T Consensus        19 l~i~~Ge~~~ilGpSGsGKSTLl~li~Gl~~p~sG~I~i~G   59 (211)
T cd03298          19 LTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLING   59 (211)
T ss_pred             EEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECC
T ss_conf             89889989999999995599999999769998852999999