HHsearch alignment for GI: 254780724 and conserved domain: pfam00625

Probab=97.45  E-value=0.0061  Score=39.16  Aligned_cols=117  Identities=13%  Similarity=0.118  Sum_probs=59.2

Q ss_pred             CCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHH---CCCCCCEEEEEEEC--------------CCCCCCCCC
Q ss_conf             8848998188888889999998303876767999642131---25678756778741--------------666653000
Q gi|254780724|r  250 RCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAEL---QLQQPHVVRLETRP--------------PNIEGEGEI  312 (483)
Q Consensus       250 ~~nilVsG~TGSGKTT~L~al~~~i~~~~rivtIED~~El---~l~~~~~v~~~~~~--------------~~~e~~~~~  312 (483)
T Consensus         1 ~klivl~GPSG~GK~tl~~~L~~~~~~~~~~~vs~TTR~~R~~E~~G~dY~Fv-s~~~F~~~i~~~~FlE~~~~~g~~YG   79 (182)
T pfam00625         1 RRPIVLSGPSGVGKSHIKKALLDEYPEKFGYSVSHTTRPPRPGEVDGKDYHFV-SKEEMENDISANEFLEHAEFNGNYYG   79 (182)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEE-CHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             98699989899999999999998486673445765547999878789657996-58999998754377762640797256


Q ss_pred             HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHH
Q ss_conf             189999875205998899657587999999999873970102000478888899999975
Q gi|254780724|r  313 TMRDLVKNCLRMRPERIILGEVRGPEVLDLLQAMNTGHDGSMGTIHANNARESFGRMEAM  372 (483)
Q Consensus       313 t~~~ll~~aLR~~PD~IiVGEiRg~Ea~~~l~A~~TGH~G~ltTlHa~s~~~ai~RL~~m  372 (483)
T Consensus        80 t~~~~I~~~~~~g~~vvl~id~~g~~~---lk~~~-~~~-~~IfI~pps~~~L~~RL~~R  134 (182)
T pfam00625        80 TSKEAIEQIAESGKICILDVDIQGVKQ---LRKAE-LSP-ISVFIKPPSLKVLQRRLKGR  134 (182)
T ss_pred             ECHHHHHHHHHCCCEEEEEECHHHHHH---HHHHC-CCC-EEEEEECCCHHHHHHHHHHC
T ss_conf             402777999867996999972899999---98749-574-89999387999999999814