HHsearch alignment for GI: 254780724 and conserved domain: pfam03215
>pfam03215 Rad17 Rad17 cell cycle checkpoint protein.
Probab=97.18 E-value=0.00091 Score=44.94 Aligned_cols=54 Identities=22% Similarity=0.239 Sum_probs=39.3
Q ss_pred CCCHHHHHHCCCCCHHHHHHHHHHHCCC---CCEEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 4667888650699889999989862258---84899818888888999999830387
Q gi|254780724|r 223 KLTLDHLVSFGAVTAEGARLLQIIGRIR---CNVLISGGTGSGKTTLLNCLTRYIDK 276 (483)
Q Consensus 223 ~~~l~~l~~~g~~~~~~~~~l~~~v~~~---~nilVsG~TGSGKTT~L~al~~~i~~ 276 (483)
T Consensus 15 P~~l~ELAVHKKKV~eV~~WL~~~~~~~~~~~iLlLtGPaG~GKTTTI~lLAkeLG~ 71 (490)
T pfam03215 15 PRRRDELAIHKKKIAEVDHWLKAVFLESNKQLILLLTGPSGCGKSTTVKVLSKELGI 71 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 887899855354399999999998547777318998798998899999999997596