HHsearch alignment for GI: 254780724 and conserved domain: pfam06431

>pfam06431 Polyoma_lg_T_C Polyomavirus large T antigen C-terminus.
Probab=95.45  E-value=0.025  Score=34.94  Aligned_cols=41  Identities=27%  Similarity=0.201  Sum_probs=31.6

Q ss_pred             CCHHHHHHHHHHHC---CCCCEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf             98899999898622---588489981888888899999983038
Q gi|254780724|r  235 VTAEGARLLQIIGR---IRCNVLISGGTGSGKTTLLNCLTRYID  275 (483)
Q Consensus       235 ~~~~~~~~l~~~v~---~~~nilVsG~TGSGKTT~L~al~~~i~  275 (483)
T Consensus       137 ~~~~i~~~lk~~v~N~PKkRy~lFkGPvNsGKTTlAAAlldLcg  180 (417)
T pfam06431       137 MDSVIYDFLKCIVYNIPKKRYWLFKGPIDSGKTTLAAALLDLCG  180 (417)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf             27999999999961887411588767867774879999998636