HHsearch alignment for GI: 254780724 and conserved domain: pfam08433

>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.

Probab=96.41  E-value=0.029  Score=34.44  Aligned_cols=105  Identities=17%  Similarity=0.238  Sum_probs=59.6

Q ss_pred             CEEEECCCCCCHHHHHHHHHHHCCC-CCCEEEEECCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEE
Q ss_conf             4899818888888999999830387-676799964213125678756778741666653000189999875205998899
Q gi|254780724|r  252 NVLISGGTGSGKTTLLNCLTRYIDK-DERIVTCEDTAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERII  330 (483)
Q Consensus       252 nilVsG~TGSGKTT~L~al~~~i~~-~~rivtIED~~El~l~~~~~v~~~~~~~~~e~~~~~t~~~ll~~aLR~~PD~Ii  330 (483)
T Consensus         1 Livl~G~P~SGKSt~A~~L~~~l~~~~~~v~vi~d-~~~~~~~-~~y~----~s~~Ek~~R~~l~s~v~r~L-s~~~iVI   73 (266)
T pfam08433         1 LIILTGLPSSGKSTRAKELAKYLEEKGYDVIVISD-ESLGIES-DDYK----DSKKEKFLRGSLRSAVKRDL-SKNTIVI   73 (266)
T ss_pred             CEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECC-CCCCCCC-CCCC----CCHHHHHHHHHHHHHHHHHH-CCCCEEE
T ss_conf             97985799996889999999999975993899780-0126753-1000----10478999999999998751-6688899


Q ss_pred             ECCCC---CH--HHHHHHHHHHCCCCEEEHHHCCCCHHHHHH
Q ss_conf             65758---79--999999998739701020004788888999
Q gi|254780724|r  331 LGEVR---GP--EVLDLLQAMNTGHDGSMGTIHANNARESFG  367 (483)
Q Consensus       331 VGEiR---g~--Ea~~~l~A~~TGH~G~ltTlHa~s~~~ai~  367 (483)
T Consensus        74 lD~~NYiKG~RYEL~C~Ak~~~t~~----c~v~~~~p~e~~~  111 (266)
T pfam08433        74 VDSLNYIKGFRYELYCIAKEAKTTY----CVVYCKAPLDTCL  111 (266)
T ss_pred             ECCCCCHHHHHHHHHHHHHHCCCCE----EEEEECCCHHHHH
T ss_conf             5487404568999999998638884----8999689989999