BLAST/PSIBLAST alignment of GI: 254780724 and GI: 209551762 at iteration 1
>gi|209551762|ref|YP_002283679.1| type II secretion system protein E [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 491
>gi|209537518|gb|ACI57453.1| type II secretion system protein E [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 491
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/428 (73%), Positives = 375/428 (87%)
Query: 54 RTPHYYEVKSTIFTTLIEMIDITQLSQYDSQSARDEIATLMNEIVSVKKITMSLDEQLDL 113
RT YY+ K+ +F+ LI+ ID++QLS+ D +SAR+EI ++N+I+++K MS+ EQ +L
Sbjct: 63 RTDEYYDTKAQVFSALIDTIDLSQLSKLDGESAREEIRDIVNDIITIKNFAMSISEQEEL 122
Query: 114 FEDLCNDILGYGPLQPLIARDDIADIMVNGSNKVFIEVNGKTVETGINFRDNEQLLSVCQ 173
ED+CND+LGYGPL+PL+ARDDIADIMVNG+ + FIEV GKT+E+ I FRDN QLLS+CQ
Sbjct: 123 LEDICNDVLGYGPLEPLLARDDIADIMVNGAGQTFIEVGGKTIESEIRFRDNAQLLSICQ 182
Query: 174 RIVNQVGRRVDESSPICDARLLDGSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFG 233
RIV+QVGRRVDESSPICDARL DGSRVNVI PPL++DGP LTIRKFKKDKLTLD LV FG
Sbjct: 183 RIVSQVGRRVDESSPICDARLPDGSRVNVIAPPLSIDGPALTIRKFKKDKLTLDQLVRFG 242
Query: 234 AVTAEGARLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYIDKDERIVTCEDTAELQLQQ 293
A+TAEGA +LQIIGR+RCNV+ISGGTGSGKTTLLNCLT YID+DER++TCEDTAELQLQQ
Sbjct: 243 AITAEGATVLQIIGRVRCNVVISGGTGSGKTTLLNCLTNYIDRDERVITCEDTAELQLQQ 302
Query: 294 PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVLDLLQAMNTGHDGS 353
PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERII+GEVRGPEV DLLQAMNTGHDGS
Sbjct: 303 PHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLLQAMNTGHDGS 362
Query: 354 MGTIHANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQRLRDGSRRITNIC 413
MGTIHAN RE R+E+MIAMGGFTLP++ VREII+SS+DVI+Q RLRDGSRRIT I
Sbjct: 363 MGTIHANTPRECLSRIESMIAMGGFTLPAKTVREIISSSVDVIIQAARLRDGSRRITQIT 422
Query: 414 EIVGMEGNVIITQDLLKYEVMGEDETGKLIGQHISTGVSRPRFWNRAAQYGEEKNLAEVL 473
E++GMEG+VIITQDL++YE+ GED G+LIG+H+STGV +P FW+RA + EEK LA L
Sbjct: 423 EVIGMEGDVIITQDLMRYEIEGEDAGGRLIGRHMSTGVGKPHFWDRARYFNEEKRLAAAL 482
Query: 474 QSLEKQSR 481
++E +++
Sbjct: 483 DAMEAKTK 490