RPSBLAST alignment for GI: 254780724 and conserved domain: TIGR02782

>gnl|CDD|163017 TIGR02782, TrbB_P, P-type conjugative transfer ATPase TrbB. The TrbB protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbB is a homolog of the vir system VirB11 ATPase, and the Flp pilus sytem ATPase TadA. Length = 299

 Score =  200 bits (510), Expect = 6e-52
 Identities = 113/308 (36%), Positives = 160/308 (51%), Gaps = 23/308 (7%)

Query: 127 LQPLIAR----DDIADIMVNGSNKVFIEVNGKTVE-TGINFRDNEQLLSVCQRIVNQVGR 181
           L P IA       + +IM+N   ++++E  G  +   G           +   + + +G 
Sbjct: 6   LGPEIAAALDDPGVVEIMLNPDGRLWVERLGSGMSPLGE--MSPADAQRIIGLVADYLGT 63

Query: 182 RVDESSPICDARL-LDGSRVNVIIPPLALDGPTLTIRKFKKDKLTLDHLVSFGAVTAEGA 240
            VD   PI +  L LDGSR   +IPP+ +  P+  IRK      TLD  V  G +TA   
Sbjct: 64  EVDRDKPIVEGELPLDGSRFEGLIPPV-VAAPSFAIRKKAVAVFTLDDYVEAGIMTAAQR 122

Query: 241 RLLQIIGRIRCNVLISGGTGSGKTTLLNCLTRYI---DKDERIVTCEDTAELQLQQPHVV 297
            +L+     R N+L+ GGTGSGKTTL N L   I   D  +R+V  EDT ELQ   P+VV
Sbjct: 123 DVLREAVLARKNILVVGGTGSGKTTLANALLAEIAKNDPTDRVVIIEDTRELQCAAPNVV 182

Query: 298 RLETRPPNIEGEGEITMRDLVKNCLRMRPERIILGEVRGPEVLDLLQAMNTGHDGSMGTI 357
           +L T          I+M  L+K  LR+RP+RII+GEVRG E LDLL+A NTGH G + TI
Sbjct: 183 QLRTSD------DAISMTRLLKATLRLRPDRIIVGEVRGGEALDLLKAWNTGHPGGIATI 236

Query: 358 HANNARESFGRMEAMIAMGGFTLPSQMVREIITSSLDVIVQTQRLRDGSRRITNICEIVG 417
           HANNA+ +  R+E +I     T    ++ E +    D+++   R     RR+  I ++ G
Sbjct: 237 HANNAKAALDRLEQLIQEVSVTPMQTLIAEAV----DLVIFIAR-TPAGRRVQEIAKVKG 291

Query: 418 MEGNVIIT 425
            +    IT
Sbjct: 292 FDDGNYIT 299