HHsearch alignment for GI: 254780725 and conserved domain: COG0784
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms].
Probab=98.53 E-value=1.1e-05 Score=54.03 Aligned_cols=117 Identities=15% Similarity=0.255 Sum_probs=87.2
Q ss_pred EEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCCH-HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 0599983898999999988641100202237306998-999999861899849999805987677889998885328998
Q gi|254780725|r 29 ISVHVFCVTDTLYSVVERSKIDPRMSQVNMRITRGSI-AEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGT 107 (427)
Q Consensus 29 ~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~~g~~-~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~ 107 (427)
T Consensus 6 ~~vLivdD~~~~~~~~~~~l~~~g---~~v-~~a~~~~~~al~~~~~~~~~dlii~D~~mp~~~G~~~~~~l~~~-~~~~ 80 (130)
T COG0784 6 LRVLVVDDEPVNRRLLKRLLEDLG---YEV-VEAADGEEEALELLRELPQPDLILLDINMPGMDGIELLRRLRAR-GPNI 80 (130)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCC---CEE-EEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCC
T ss_conf 889997899999999999998779---789-99578399999998627899999980688788889999999971-8999
Q ss_pred EEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHH-HHHHHHHCC
Q ss_conf 0899816871899999997656264318999899-999763102
Q gi|254780725|r 108 KVIVIGDTNDVSLYRALISNHVSEYLIEPLSVAD-IINSISAIF 150 (427)
Q Consensus 108 ~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~-l~~ai~~~~ 150 (427)
T Consensus 81 pvv~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~ 124 (130)
T COG0784 81 PVILLTAYADEADRERALAAGADDYLTKPIFLEEELLAALRRLL 124 (130)
T ss_pred CEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
T ss_conf 68999867867659999976876897589987999999999998