HHsearch alignment for GI: 254780725 and conserved domain: COG1066
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones].
Probab=94.59 E-value=0.34 Score=26.55 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=43.1
Q ss_pred HCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 765626431899989999976310233222345675379997469887756899999999996269949999787
Q gi|254780725|r 126 SNHVSEYLIEPLSVADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLD 200 (427)
Q Consensus 126 r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlD 200 (427)
T Consensus 66 ~i~~~~~~Ri~tg~~EldRVLGGG~V--------~Gs~i-LIgGdPGIGKSTLLLQva~~lA~~-~-~vLYVsGE 129 (456)
T COG1066 66 DIELEEEPRISTGIEELDRVLGGGLV--------PGSVI-LIGGDPGIGKSTLLLQVAARLAKR-G-KVLYVSGE 129 (456)
T ss_pred CCEEEECCCCCCCHHHHHHHHCCCCC--------CCCEE-EECCCCCCCHHHHHHHHHHHHHHC-C-CEEEEECC
T ss_conf 01122224235781888765367723--------66179-973689877989999999998705-9-57999677