HHsearch alignment for GI: 254780725 and conserved domain: COG1492
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism].
Probab=96.13 E-value=0.03 Score=33.04 Aligned_cols=194 Identities=12% Similarity=0.192 Sum_probs=101.1
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCC--CCCC---C---HHHHHCC-C---CCHH
Q ss_conf 379997469887756899999999996269949999787989860334389--9878---9---8886318-4---5612
Q gi|254780725|r 162 CSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDK--DPIN---S---ISDAIYP-V---GRID 229 (427)
Q Consensus 162 rvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~--~~~~---~---l~d~l~~-~---~rlD 229 (427)
T Consensus 2 ~~iMv~GT~S~~GKS~~~aglcRi~~~-~G~~V~------PFK~QNMsLNs~it~~G~EIgraQ~~QA~Aa~i~p~v~mN 74 (486)
T COG1492 2 KAIMVQGTTSDAGKSFLVAGLCRILAR-RGYRVA------PFKSQNMSLNSAITPGGGEIGRAQALQALAAGIEPSVHMN 74 (486)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHH-CCCCCC------CCHHHHCCCCCEECCCCCEEEHHHHHHHHHCCCCCCCCCC
T ss_conf 853787214776546752453488873-577547------8706543466078779968755066789873998743428
Q ss_pred HHHHHHHHHCCCC-CEEEEECCCCCCCHHCC---------CHHHHHHHHHHHHHCCCEEEECCCCCCCHH--------HH
Q ss_conf 4337653202489-80687248761203207---------999999989998512888997388888989--------99
Q gi|254780725|r 230 KAFVSRLPVFYAE-NLSILTAPAMLSRTYDF---------DEKMIVPVLDILEQIFPLVILDVPHVWNSW--------TQ 291 (427)
Q Consensus 230 ~~~l~~~l~~~~~-gL~lL~a~~~~~~~~~~---------~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~--------~~ 291 (427)
T Consensus 75 PvLLK----P~sd~~sQVIv~G~~~G~~s~~~yy~~~~~~l~~~v~~s~~~l~~~~d~Vv~EGAGSpaEiNlr~~Di~Nm 150 (486)
T COG1492 75 PVLLK----PCSDTGSQVIVMGKDIGRKSAVEYYQEGKGLLWVAVKESLERLDREYDVVVIEGAGSPAEINLRDRDIANM 150 (486)
T ss_pred CEEEE----ECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCCCCCE
T ss_conf 77870----35888447999463446657178899988999999999998754105589996379823227663661100
Q ss_pred HHHHHCC-CCCCCCCCCH----HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC-CHHHHHHHHHHHCCCEEEEECC
Q ss_conf 9986201-2543578776----88999999999999819876753899956589875-2005999999848953799068
Q gi|254780725|r 292 EVLTLSD-KVVITTSLDL----AGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKK-PEISISDFCAPLGITPSAIIPF 365 (427)
Q Consensus 292 ~~L~~AD-~vviV~~p~~----~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~~-~~i~~~~~~~~lg~~~~~~IP~ 365 (427)
T Consensus 151 ~~a~~~dapvILV~DIdRGGvfAsl~GT~~lL~~~~r~----~VkG~iINkFRGd~~ll~~gik~Le~~tg~~vlGv~P~ 226 (486)
T COG1492 151 GVAEIADAPVILVGDIDRGGVFASLYGTLALLPESDRA----LVKGFIINKFRGDESLLDPGLKWLEELTGVPVLGVLPY 226 (486)
T ss_pred EEEHHCCCCEEEEEEECCCCEEEEEEEHHEECCHHHHC----CEEEEEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCC
T ss_conf 22023389889999511564541730212236876760----01479996317987887459999998619746756525
Q ss_pred CHHHH
Q ss_conf 79999
Q gi|254780725|r 366 DGAVF 370 (427)
Q Consensus 366 D~~~~ 370 (427)
T Consensus 227 ~~~~~ 231 (486)
T COG1492 227 LKDAL 231 (486)
T ss_pred CCCCC
T ss_conf 55455