HHsearch alignment for GI: 254780725 and conserved domain: COG3279

Probab=96.04  E-value=0.05  Score=31.61  Aligned_cols=107  Identities=11%  Similarity=0.220  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCH
Q ss_conf             99999998864110020223730699899999986189984999980598767788999888532899808998168718
Q gi|254780725|r   39 TLYSVVERSKIDPRMSQVNMRITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVIVIGDTNDV  118 (427)
Q Consensus        39 ~~~~~~~~~~~drr~~~~~~~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~Vivig~~~d~  118 (427)
T Consensus        12 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fldI~~~~~~G~ela~~i~~~-~~~~~Ivfvt~~~~~   87 (244)
T COG3279          12 LAREELRRILN--EIPDIEIVGEAENGEEALQLLQGL-RPDLVFLDIAMPDINGIELAARIRKG-DPRPAIVFVTAHDEY   87 (244)
T ss_pred             HHHHHHHHHHH--HHHHCCHHHHHCCHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHCCC-CCCCEEEEEEEHHHH
T ss_conf             67999999988--744211113312303178887602-57769997237652449999986156-988539999861543


Q ss_pred             HHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC
Q ss_conf             999999976562643189998999997631023
Q gi|254780725|r  119 SLYRALISNHVSEYLIEPLSVADIINSISAIFT  151 (427)
Q Consensus       119 ~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~  151 (427)
T Consensus        88 a~--~afev~a~d~i~kp~~~~~l~~~l~~~~~  118 (244)
T COG3279          88 AV--AAFEVEALDYLLKPISEERLAKTLERLRR  118 (244)
T ss_pred             HH--HHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             23--33133466774285426899999999888