HHsearch alignment for GI: 254780725 and conserved domain: COG3640
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning].
Probab=99.94 E-value=1.3e-24 Score=170.53 Aligned_cols=228 Identities=18% Similarity=0.234 Sum_probs=174.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCC-CC---HHHHHCC----CCCHH-----
Q ss_conf 79997469887756899999999996269949999787989860334389987-89---8886318----45612-----
Q gi|254780725|r 163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPI-NS---ISDAIYP----VGRID----- 229 (427)
Q Consensus 163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~-~~---l~d~l~~----~~rlD----- 229 (427)
T Consensus 2 kIaI~G-KGG~GKTtiaalll~~l~~~~~~~VLvVDaDp-d~nL~~~LGve~~~~~lg~~~e~~~k~~~a~~~~~~~~~f 79 (255)
T COG3640 2 KIAITG-KGGVGKTTIAALLLKRLLSKGGYNVLVVDADP-DSNLPEALGVEEPMKYLGGKRELLKKRTGAEPGGPPGEMF 79 (255)
T ss_pred EEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 699965-99765899999999999864895499994899-9990776299998755300899999986147899955300
Q ss_pred ------HHHHHHHHHCCCCCEEEEECCCCC---CCHHCCCHHHHHHHHHHHHHC-CCEEEECCCCCCCHHHHHHHHHCCC
Q ss_conf ------433765320248980687248761---203207999999989998512-8889973888889899999862012
Q gi|254780725|r 230 ------KAFVSRLPVFYAENLSILTAPAML---SRTYDFDEKMIVPVLDILEQI-FPLVILDVPHVWNSWTQEVLTLSDK 299 (427)
Q Consensus 230 ------~~~l~~~l~~~~~gL~lL~a~~~~---~~~~~~~~~~l~~ll~~l~~~-yd~VIiD~p~~~~~~~~~~L~~AD~ 299 (427)
T Consensus 80 k~~~~~~di~~e~~~e~~-~~~LLvmGkie~~GeGC~Cp~~allR~~l~~l~~~~~e~VivDtEAGiEHfgRg~~~~vD~ 158 (255)
T COG3640 80 KENPLVSDLPDEYLVENG-DIDLLVMGKIEEGGEGCACPMNALLRRLLRHLILNRYEVVIVDTEAGIEHFGRGTIEGVDL 158 (255)
T ss_pred CCCCCHHHHHHHHHHHCC-CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCE
T ss_conf 137543351698850068-8007995255679974316278999999999751667489996334566656563257877
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCC
Q ss_conf 54357877688999999999999819876753899956589875200599999984895379906879999998847961
Q gi|254780725|r 300 VVITTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKM 379 (427)
Q Consensus 300 vviV~~p~~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~p 379 (427)
T Consensus 159 vivVvDpS~~sl~taeri~~L~~elg--~k~i~~V~NKv~e~---e~~~~~~~~~~~~~vlg~iP~d~~v~-~~dl~G~p 232 (255)
T COG3640 159 VIVVVDPSYKSLRTAERIKELAEELG--IKRIFVVLNKVDEE---EELLRELAEELGLEVLGVIPYDPEVV-EADLKGEP 232 (255)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHC--CCEEEEEEEECCCH---HHHHHHHHHCCCCEEEEECCCCHHHH-HCCCCCCC
T ss_conf 99995787788888999999998718--75499999503411---57777653227974899716987887-42256884
Q ss_pred EEEECCCCHHHHHHHHHHHHHHC
Q ss_conf 89888999899999999999852
Q gi|254780725|r 380 IHEVDPKSAIANLLVDFSRVLMG 402 (427)
Q Consensus 380 i~e~~p~s~~a~~~~~La~~i~g 402 (427)
T Consensus 233 l~~~-~--~v~~~i~~I~~~l~~ 252 (255)
T COG3640 233 LNEE-P--EVLKEIEEIAERLIK 252 (255)
T ss_pred CCCC-H--HHHHHHHHHHHHHHH
T ss_conf 2123-5--557899999999985