HHsearch alignment for GI: 254780725 and conserved domain: PRK07471

>PRK07471 DNA polymerase III subunit delta'; Validated.
Probab=96.78  E-value=0.041  Score=32.16  Aligned_cols=147  Identities=14%  Similarity=0.082  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCH
Q ss_conf             89999976310233222345675379997469887756899999999996269949999787989860334389987898
Q gi|254780725|r  139 VADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSI  218 (427)
Q Consensus       139 ~~~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l  218 (427)
T Consensus        22 qe~~~~~L~~a~~-----~grl~HA~Lf~Gp-~GiGK~tlA~~~A~~ll~~-~-~~~----~~~~~~~~~~l~~~~~~p~   89 (363)
T PRK07471         22 HAAAEAALLDAYR-----SGRLHHAWLIGGP-QGIGKATLAYRMARFLLAT-P-PPG----GDAVFPPPASLAVDPDHPV   89 (363)
T ss_pred             HHHHHHHHHHHHH-----CCCCCCEEEEECC-CCCCHHHHHHHHHHHHHCC-C-CCC----CCCCCCCHHHHCCCCCCCH
T ss_conf             1999999999998-----5997645876799-9818899999999998579-9-977----7776787053125877728


Q ss_pred             HHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCC---CCCHHCCCHHHHHHHHHHHH-----HCCCEEEECCCCCCCHHH
Q ss_conf             8863184561243376532024898068724876---12032079999999899985-----128889973888889899
Q gi|254780725|r  219 SDAIYPVGRIDKAFVSRLPVFYAENLSILTAPAM---LSRTYDFDEKMIVPVLDILE-----QIFPLVILDVPHVWNSWT  290 (427)
Q Consensus       219 ~d~l~~~~rlD~~~l~~~l~~~~~gL~lL~a~~~---~~~~~~~~~~~l~~ll~~l~-----~~yd~VIiD~p~~~~~~~  290 (427)
T Consensus        90 ~r~i--------------~~~~hpdl~~i~r~~d~k~~~~~~~I~Vd~iR~l~~~~~~~p~~g~~kV~IId~ad~mn~~a  155 (363)
T PRK07471         90 ARRI--------------AAGAHGGLLTLERSWNEKGKRLRTVITVDEVRETIGFFGLTAAEGGWRVVIVDTADEMNANA  155 (363)
T ss_pred             HHHH--------------HCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHH
T ss_conf             9999--------------52699984667620011333212445399999999997248524896699986878738899


Q ss_pred             HHHHHH------CCCCCCCCCCCHHHH
Q ss_conf             999862------012543578776889
Q gi|254780725|r  291 QEVLTL------SDKVVITTSLDLAGL  311 (427)
Q Consensus       291 ~~~L~~------AD~vviV~~p~~~sl  311 (427)
T Consensus       156 aNALLK~LEEPP~~t~fiLit~~~~~l  182 (363)
T PRK07471        156 ANALLKVLEEPPARSLLLLVSHAPARL  182 (363)
T ss_pred             HHHHHHHHCCCCCCEEEEEEECCHHHC
T ss_conf             999999721589883899863997777