HHsearch alignment for GI: 254780725 and conserved domain: PRK10365
>PRK10365 transcriptional regulatory protein ZraR; Provisional.
Probab=99.68 E-value=6.4e-15 Score=110.90 Aligned_cols=166 Identities=12% Similarity=0.181 Sum_probs=128.0
Q ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHHHCEE-EEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 3059998389899999998864110020223-730699899999986189984999980598767788999888532899
Q gi|254780725|r 28 RISVHVFCVTDTLYSVVERSKIDPRMSQVNM-RITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSG 106 (427)
Q Consensus 28 ~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~-~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~ 106 (427)
T Consensus 5 ~~~ILIVDDd~~~~~~l~~~L~-----~~G~~v~~a~~~~~al~~l~~~~-~DlvllD~~mp~~~Gl~lL~~l~~~-~p~ 77 (441)
T PRK10365 5 NIDILVVDDDISHCTILQALLR-----GWGYNVALANSGRQALEQVREQV-FDLVLCDVRMAEMDGIATLKEIKAL-NPA 77 (441)
T ss_pred CCEEEEECCCHHHHHHHHHHHH-----HCCCEEEEECCHHHHHHHHHCCC-CCEEEECCCCCCCCHHHHHHHHHHH-CCC
T ss_conf 9859998398999999999999-----77998999899999999986489-9999988999999899999999842-989
Q ss_pred CEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCC-----------CCCC-----------------
Q ss_conf 808998168718999999976562643189998999997631023322-----------2345-----------------
Q gi|254780725|r 107 TKVIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQE-----------EGKG----------------- 158 (427)
Q Consensus 107 ~~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~-----------~~~~----------------- 158 (427)
T Consensus 78 ~pvIviT~~~~~~~av~A~k~GA~Dyl~KP~~~~~L~~~i~~al~~~~~~~~~~~~~~~~~~~liG~S~am~~v~~~i~~ 157 (441)
T PRK10365 78 IPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSIDAETPAVSASQFGMVGKSPAMQHLLSEIAL 157 (441)
T ss_pred CCEEEEECCCCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEECCHHHHHHHHHHHH
T ss_conf 82899969999899999998285123407888999999999999999876520000122257866689999999999999
Q ss_pred --CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf --67537999746988775689999999999626994999978798
Q gi|254780725|r 159 --SSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLP 202 (427)
Q Consensus 159 --~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~ 202 (427)
T Consensus 158 ~A~s~~pVLI~G-E~GTGK~~~Ar~I-H~~S~r~~~pfv~vnC~~l 201 (441)
T PRK10365 158 VAPSEATVLIHG-DSGTGKELVARAI-HASSARSEKPLVTLNCAAL 201 (441)
T ss_pred HHCCCCCEEEEC-CCCHHHHHHHHHH-HHCCCCCCCCCEEEECCCC
T ss_conf 848899489989-9981099999999-9657877898079878989