HHsearch alignment for GI: 254780725 and conserved domain: PRK10610
>PRK10610 chemotaxis regulatory protein CheY; Provisional.
Probab=99.36 E-value=5.7e-11 Score=86.62 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=97.9
Q ss_pred CEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHC-CCC
Q ss_conf 3059998389899999998864110020223730699899999986189984999980598767788999888532-899
Q gi|254780725|r 28 RISVHVFCVTDTLYSVVERSKIDPRMSQVNMRITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVC-DSG 106 (427)
Q Consensus 28 ~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~-~p~ 106 (427)
T Consensus 5 ~lrILivDD~~~~r~~l~~~L~~~g~~---~v~~a~~g~~al~~~~~~-~~Dlil~D~~MP~~dG~el~~~ir~~~~~~~ 80 (129)
T PRK10610 5 ELKFLVVDDFSTMRRIVRNLLKELGFN---NVEEAEDGVDALNKLQAG-GFGFVISDWNMPNMDGLELLKTIRADGAMSA 80 (129)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHHCCCCCC
T ss_conf 989999979899999999999986997---899989999999999858-9999998189999989999999985777789
Q ss_pred CEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC
Q ss_conf 808998168718999999976562643189998999997631023
Q gi|254780725|r 107 TKVIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFT 151 (427)
Q Consensus 107 ~~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~ 151 (427)
T Consensus 81 ~Pii~~T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~vl~ 125 (129)
T PRK10610 81 LPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125 (129)
T ss_pred CCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 968999886899999999986998899898999999999999997