HHsearch alignment for GI: 254780725 and conserved domain: PRK10766
>PRK10766 DNA-binding transcriptional regulator TorR; Provisional.
Probab=99.16 E-value=5.2e-10 Score=80.74 Aligned_cols=115 Identities=13% Similarity=0.174 Sum_probs=93.0
Q ss_pred EEEEEECCHHHHHHHHHHHHHHHHHHCEEEEE-CCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf 59998389899999998864110020223730-69989999998618998499998059876778899988853289980
Q gi|254780725|r 30 SVHVFCVTDTLYSVVERSKIDPRMSQVNMRIT-RGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTK 108 (427)
Q Consensus 30 ~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~-~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~ 108 (427)
T Consensus 4 kILlVEDD~~l~~~l~~~-----L~~~g~~V~~~~~~~~a~~~l~~~-~~DlvilDi~lp~~~G~el~~~iR~~--~~~p 75 (224)
T PRK10766 4 HILVVEDEPVTRARLQGY-----FEQEGYRVSEAASGAGMREIMQNQ-HVDLILLDINLPGEDGLMLTRELRSR--STVG 75 (224)
T ss_pred EEEEECCCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHHHC-CCCEEEECCCCCCCCCCCHHHHHHHC--CCCC
T ss_conf 199991999999999999-----998799999989999999999608-99999988999988766137676304--7855
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 89981687189999999765626431899989999976310233
Q gi|254780725|r 109 VIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTP 152 (427)
Q Consensus 109 Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~ 152 (427)
T Consensus 76 iI~lta~~~~~~~i~al~~GaddYl~KPf~~~eL~ari~allrR 119 (224)
T PRK10766 76 IILVTGRTDSIDRIVGLEMGADDYVTKPFELRELLVRVKNLLWR 119 (224)
T ss_pred EEEECCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 68633558989999999849414513999889999999999725