HHsearch alignment for GI: 254780725 and conserved domain: PRK10840

>PRK10840 transcriptional regulator RcsB; Provisional.
Probab=99.11  E-value=6.9e-09  Score=73.83  Aligned_cols=120  Identities=9%  Similarity=0.127  Sum_probs=93.1

Q ss_pred             CEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCC---CCHHHHHHHHHHHCC
Q ss_conf             30599983898999999988641100202237306998999999861899849999805987---677889998885328
Q gi|254780725|r   28 RISVHVFCVTDTLYSVVERSKIDPRMSQVNMRITRGSIAEAVSCFSDSSTPDLIIVQTKVDS---REVLSALEPLAEVCD  104 (427)
Q Consensus        28 ~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~---~~~~~~l~~la~~~~  104 (427)
T Consensus         3 ~irIlIvDDh~lvr~Gl~~~L~~--~~~~~vvg~a~~~~~~~~~~~~~-~pDvvllDl~mpg~~~~dGl~~~~~i~~~-~   78 (216)
T PRK10840          3 NMNVIIADDHPIVLFGIRKSLEQ--IEWVNVVGEFEDSTALINNLPKL-DAHVLITDLSMPGDKYGDGITLIKYIKRH-F   78 (216)
T ss_pred             CCEEEEECCHHHHHHHHHHHHCC--CCCCEEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCHHHHHHHHHHH-C
T ss_conf             88899988979999999999815--99968999879999999998623-98989982677999887899999999985-8


Q ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCC
Q ss_conf             99808998168718999999976562643189998999997631023
Q gi|254780725|r  105 SGTKVIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFT  151 (427)
Q Consensus       105 p~~~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~  151 (427)
T Consensus        79 p~~~vivls~~~~~~~v~~al~~Ga~Gyl~K~~~~~~L~~AI~~v~~  125 (216)
T PRK10840         79 PSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQK  125 (216)
T ss_pred             CCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf             99808998477878999999858974899878999999999999987