HHsearch alignment for GI: 254780725 and conserved domain: PRK10875
>PRK10875 recD exonuclease V subunit alpha; Provisional.
Probab=93.50 E-value=0.44 Score=25.80 Aligned_cols=74 Identities=22% Similarity=0.262 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCC-------CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCC---CCEEEEECCCCC
Q ss_conf 189998999997631023322234-------5675379997469887756899999999996269---949999787989
Q gi|254780725|r 134 IEPLSVADIINSISAIFTPQEEGK-------GSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFA---METLLADLDLPY 203 (427)
Q Consensus 134 ~~P~~~~~l~~ai~~~~~~~~~~~-------~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~---~~VlLvDlDl~~ 203 (427)
T Consensus 127 ~~~~~~~~~~~~L~~lf~~~~~~dwQk~A~a~Al~~~~~vIsGGPGTGKTttV~~lLa~l~~~~~~~~l~I~La---APT 203 (607)
T PRK10875 127 AIEVDEALLAQTLDALFPPGDEVNWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQLADGERCRIRLA---APT 203 (607)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEE---CCH
T ss_conf 88899899999999857998885189999999875577899679998778899999999999645899708998---822
Q ss_pred CCCHHHC
Q ss_conf 8603343
Q gi|254780725|r 204 GTANINF 210 (427)
Q Consensus 204 g~~~~~l 210 (427)
T Consensus 204 GKAAaRL 210 (607)
T PRK10875 204 GKAAARL 210 (607)
T ss_pred HHHHHHH
T ss_conf 8999999