HHsearch alignment for GI: 254780725 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=99.00 E-value=2.8e-08 Score=70.06 Aligned_cols=129 Identities=14% Similarity=0.197 Sum_probs=95.8
Q ss_pred HHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCEEEE-ECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHH
Q ss_conf 0677640187305999838989999999886411002022373-069989999998618998499998059876778899
Q gi|254780725|r 18 NLSESMCSLPRISVHVFCVTDTLYSVVERSKIDPRMSQVNMRI-TRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSAL 96 (427)
Q Consensus 18 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v-~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l 96 (427)
T Consensus 515 ~~~~~~~~~~~lrILvVEDn~iN~~V~~~~-----L~~lG~~v~~A~nG~eALe~~~~~-~fDLILMDiqMP~MDG~Eat 588 (779)
T PRK11091 515 AFDEDDMPLPALNILLVEDIELNVIVARSL-----LEKLGNSVDVAMTGKDALEMFKPG-EYDLVLLDIQLPDMTGLDVA 588 (779)
T ss_pred CCCCCCCCCCCCEEEEECCCHHHHHHHHHH-----HHHCCCEEEEECCHHHHHHHHCCC-CCCEEEEECCCCCCCHHHHH
T ss_conf 556666688888189986889999999999-----997599999989999999985069-99989982899999789999
Q ss_pred HHHHHHCCCC--CEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCC
Q ss_conf 9888532899--80899816871899999997656264318999899999763102332
Q gi|254780725|r 97 EPLAEVCDSG--TKVIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQ 153 (427)
Q Consensus 97 ~~la~~~~p~--~~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~ 153 (427)
T Consensus 589 r~IR~~~~~~~~~PIIALTAna~-~d~~~~l~aGMdd~L~KPi~~~~L~~~l~~~~~~~ 646 (779)
T PRK11091 589 RELRERYGREDLPPLVALTANVL-KDKQEYLDAGMDDVLSKPLSVPALTAMIKKFWDTQ 646 (779)
T ss_pred HHHHHCCCCCCCCCEEEEECCCC-HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHCCC
T ss_conf 99984257689992798818741-76999997699847518898999999999984645