HHsearch alignment for GI: 254780725 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.01  E-value=3.5e-08  Score=69.46  Aligned_cols=111  Identities=14%  Similarity=0.117  Sum_probs=56.1

Q ss_pred             EEEEEEECCHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHH-HHHHCCCCC
Q ss_conf             0599983898999999988641100202237306998999999861899849999805987677889998-885328998
Q gi|254780725|r   29 ISVHVFCVTDTLYSVVERSKIDPRMSQVNMRITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEP-LAEVCDSGT  107 (427)
Q Consensus        29 ~~~~~f~~~~~~~~~~~~~~~drr~~~~~~~v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~-la~~~~p~~  107 (427)
T Consensus       537 ~~vlvve~~~~~~~~l~~~L~~~-----g~~v~~~~~---~~~l~~-~~~D~~li~~~~~~~~~~~~~~~~l~~~~~~~~  607 (920)
T PRK11107        537 KRLLYVEPNSLAAQATLDLLSET-----PLEVTYSPT---LSQLPE-AHYDYLLLGCPVTFREPLTMLHERLAKAKSMTD  607 (920)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHC-----CCEEEECCC---HHHHHC-CCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf             76999769778999999999974-----964575178---877513-688879961666665406678999863003578


Q ss_pred             EEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH
Q ss_conf             08998168718999999976562643189998999997631
Q gi|254780725|r  108 KVIVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISA  148 (427)
Q Consensus       108 ~Vivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~  148 (427)
T Consensus       608 ~~il~~~s~~~~~~~~~~~~~~~~~L~kPv~~~~L~~~L~~  648 (920)
T PRK11107        608 FLILALPCHEQVNAEQLKQPGADACLSKPLSETRLLPALLT  648 (920)
T ss_pred             CEEEEECCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHC
T ss_conf             46997156434557887642530211277768899998722