HHsearch alignment for GI: 254780725 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=91.86 E-value=0.33 Score=26.58 Aligned_cols=68 Identities=9% Similarity=0.087 Sum_probs=41.8
Q ss_pred HCCCCEEE------CCCCCHHHHHHHHH--HCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 76562643------18999899999763--10233222345675379997469887756899999999996269949999
Q gi|254780725|r 126 SNHVSEYL------IEPLSVADIINSIS--AIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLA 197 (427)
Q Consensus 126 r~Gv~dyl------~~P~~~~~l~~ai~--~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLv 197 (427)
T Consensus 61 rs~i~~~h~~~~f~ny~~~~~~~~~a~~~a~~~~~---~F~~~~~NlIf~G-~pGtGKTHLA~AIg~~a~~-~G~sVlF~ 135 (248)
T PRK12377 61 RSGIQPLHRKCSFANYQVQNDGQRYALSQAKSIAD---ELMTGCTNFVFSG-KPGTGKNHLAAAIGNRLLA-KGRSVIVV 135 (248)
T ss_pred CCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH---HHHCCCCEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEE
T ss_conf 04685376438634564578789999999999999---8731886089989-9998788999999999998-79969998
Q ss_pred E
Q ss_conf 7
Q gi|254780725|r 198 D 198 (427)
Q Consensus 198 D 198 (427)
T Consensus 136 t 136 (248)
T PRK12377 136 T 136 (248)
T ss_pred E
T ss_conf 8