HHsearch alignment for GI: 254780725 and conserved domain: PRK13232

>PRK13232 nifH nitrogenase reductase; Reviewed.
Probab=100.00  E-value=5.8e-35  Score=234.15  Aligned_cols=257  Identities=14%  Similarity=0.140  Sum_probs=194.6

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCC
Q ss_conf             37999746988775689999999999626994999978798986033438998789888631845612433765320248
Q gi|254780725|r  162 CSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYA  241 (427)
Q Consensus       162 rvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~~~  241 (427)
T Consensus         2 ~~iaiyG-KGGVGKSTTt~NLaAALA~-~GkkVL~IgcDPk~dsT~~l~gg~~~~tvld~l~~~~~-~~~~l~~v~~~g~   78 (273)
T PRK13232          2 RQIAIYG-KGGIGKSTTTQNLTAALST-MGNKILLVGCDPKADSTRMLLGGLNQKTVLDTLRSEGD-EGVDLDVVMQPGF   78 (273)
T ss_pred             CEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCC-CCCCHHHEEECCC
T ss_conf             5799979-9866588789999999997-79969998978844277788589988879999986185-6563666154288


Q ss_pred             CCEEEEECCCCCCCH-----HCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH---HHHHCCCCCCCCCCCHHHHHH
Q ss_conf             980687248761203-----207999999989998512888997388888989999---986201254357877688999
Q gi|254780725|r  242 ENLSILTAPAMLSRT-----YDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQE---VLTLSDKVVITTSLDLAGLRN  313 (427)
Q Consensus       242 ~gL~lL~a~~~~~~~-----~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~---~L~~AD~vviV~~p~~~slr~  313 (427)
T Consensus        79 ~gv~cve~ggp~~g~gcagrgii~~~~lle~l~~~~~~~Dyvl~Dvlgdvvcggfa~P~~~~~A~evlIVts~E~~slya  158 (273)
T PRK13232         79 GDIKCVESGGPEPGVGCAGRGIITSIGLLENLGAYTDDLDYVFYDVLGDVVCGGFAMPIREGKAKEIYIVASGELMAIYA  158 (273)
T ss_pred             CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHH
T ss_conf             97389868998767654530478888899970832147988999414733236531442016576899980760888999


Q ss_pred             HHHHHHHHHHCCC-CCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf             9999999998198-767538999565898752005999999848953799068799999988479618988899989999
Q gi|254780725|r  314 SKNLIDVLKKLRP-ADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAIANL  392 (427)
Q Consensus       314 a~~ll~~l~~~~~-~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~a~~  392 (427)
T Consensus       159 annI~k~i~~~~~~~~rl~GiI~n~r~~~~~-~e~v~~fa~~~g~~vi~~IPr~~~v-~~A~~~g~tvie~~P~S~~A~a  236 (273)
T PRK13232        159 ANNICKGLAKFAKGGARLGGIICNSRNVDGE-RELLEAFAKKLGSQLIHFVPRDNIV-QRAEINRKTVIDFDPESNQAKE  236 (273)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECCCCCCH-HHHHHHHHHHCCCCEEEECCCCHHH-HHHHHCCCEEEEECCCCHHHHH
T ss_conf             9999999999962188501488505577638-9999999997199669978997788-7648729835897999979999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9999999852212232111058999987423
Q gi|254780725|r  393 LVDFSRVLMGRVTVSKPQSAMYTKIKKIFNM  423 (427)
Q Consensus       393 ~~~La~~i~gr~~~~~~k~~~~~~l~~lf~r  423 (427)
T Consensus       237 Y~~LA~~I~~~~~~~~P~pl~~~el~~~~~~  267 (273)
T PRK13232        237 YLTLAHNVQNNDKLVVPTPLPMEELEAMMVE  267 (273)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             9999999985899877887998999999998