HHsearch alignment for GI: 254780725 and conserved domain: PRK13236
>PRK13236 nitrogenase reductase; Reviewed.
Probab=99.97 E-value=5.5e-30 Score=203.54 Aligned_cols=259 Identities=14% Similarity=0.169 Sum_probs=200.4
Q ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 75379997469887756899999999996269949999787989860334389987898886318456124337653202
Q gi|254780725|r 160 SGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVF 239 (427)
Q Consensus 160 ~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~ 239 (427)
T Consensus 5 ~mk~IAiYG-KGGIGKSTts~NlsAAlA~-~G~rVl~IGCDPK~DSTr~Llgg~~~~tvld~~~e~~~~ed~~ledvv~~ 82 (295)
T PRK13236 5 NIRQIAFYG-KGGIGKSTTSQNTLAAMAE-MGQRILIVGCDPKADSTRLMLHSKAQTTVLHLAAERGAVEDLELEEVMLT 82 (295)
T ss_pred CCEEEEEEC-CCCCCHHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHC
T ss_conf 761899967-9843475789999999997-79969997889802667876389999718888876098444548887422
Q ss_pred CCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHH-----HCCCEEEECCCCC-CCHHHHHHHH--HCCCCCCCCCCCHHHH
Q ss_conf 489806872487612032079999999899985-----1288899738888-8989999986--2012543578776889
Q gi|254780725|r 240 YAENLSILTAPAMLSRTYDFDEKMIVPVLDILE-----QIFPLVILDVPHV-WNSWTQEVLT--LSDKVVITTSLDLAGL 311 (427)
Q Consensus 240 ~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~-----~~yd~VIiD~p~~-~~~~~~~~L~--~AD~vviV~~p~~~sl 311 (427)
T Consensus 83 G~~Gi~CvEsGGP-ePGvGCAGRGIitai~lLee~ga~e~~D~V~yDVLGDVVCGGFAmPir~g~A~evyiVtSge~mal 161 (295)
T PRK13236 83 GFRGVRCVESGGP-EPGVGCAGRGIITAINFLEENGAYQDLDFVSYDVLGDVVCGGFAMPIREGKAQEIYIVTSGEMMAM 161 (295)
T ss_pred CCCCCEEEECCCC-CCCCCCCCCEEEEHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH
T ss_conf 6588379878999-998988886254056679871985569989885057753267546566787648999956818899
Q ss_pred HHHHHHHHHHHHC--CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHH
Q ss_conf 9999999999981--98767538999565898752005999999848953799068799999988479618988899989
Q gi|254780725|r 312 RNSKNLIDVLKKL--RPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAI 389 (427)
Q Consensus 312 r~a~~ll~~l~~~--~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~ 389 (427)
T Consensus 162 yAANNI~~~i~~~a~~g~~rlgGiI~N~r~~~~e~-~~v~~fa~~~gt~ii~~iPr~~-~V~~ae~~~~TviE~~P~s~~ 239 (295)
T PRK13236 162 YAANNIARGILKYAHTGGVRLGGLICNSRNVDREI-ELIETLAKRLNTQMIHFVPRDN-IVQHAELRRMTVNEYAPDSNQ 239 (295)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHH-HHHHHHHHHHCCCEEEECCCCH-HHHHHHHCCCEEEEECCCCHH
T ss_conf 99999999999997426970358996078887479-9999999981992699657838-888999739876887889779
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9999999999852212232111058999987423
Q gi|254780725|r 390 ANLLVDFSRVLMGRVTVSKPQSAMYTKIKKIFNM 423 (427)
Q Consensus 390 a~~~~~La~~i~gr~~~~~~k~~~~~~l~~lf~r 423 (427)
T Consensus 240 A~~Yr~LA~~i~~n~~~~vP~Pl~~~eL~~l~~~ 273 (295)
T PRK13236 240 GNEYRILAKKIINNDKLTIPTPIEMEELEELLIE 273 (295)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999999999985899867898998899999998