HHsearch alignment for GI: 254780725 and conserved domain: TIGR01005
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family; InterPro: IPR005700 The bacterial exopolysaccharide transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed at least seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export.; GO: 0015542 sugar efflux transmembrane transporter activity, 0006859 extracellular carbohydrate transport.
Probab=99.56 E-value=7.9e-14 Score=104.20 Aligned_cols=177 Identities=20% Similarity=0.206 Sum_probs=143.9
Q ss_pred CCE-EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 753-7999746988775689999999999626994999978798986033438998789888631845612433765320
Q gi|254780725|r 160 SGC-SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPV 238 (427)
Q Consensus 160 ~gr-vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~ 238 (427)
T Consensus 559 e~~Pvv~~~~p~p~~Gks~i~an~aaliA~-ggkR~llidad~rk~~l~q~~~~~~~~GL~d~LaG~rs~~~----~~~~ 633 (778)
T TIGR01005 559 ESEPVVALASPLPDVGKSIIEANLAALIAA-GGKRVLLIDADIRKAALSQILVKAEKSGLLDLLAGERSLEL----DVKA 633 (778)
T ss_pred CCCCEEEECCCCCCCCHHHHHHHHHHHHHC-CCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHH----HCCC
T ss_conf 898758856888866568899999999832-68717873267760555644214788853755642465663----0340
Q ss_pred CCCCCEEEEECC----CCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHH-HHHCCCCC-CCCCCCHHHHH
Q ss_conf 248980687248----7612032079999999899985128889973888889899999-86201254-35787768899
Q gi|254780725|r 239 FYAENLSILTAP----AMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEV-LTLSDKVV-ITTSLDLAGLR 312 (427)
Q Consensus 239 ~~~~gL~lL~a~----~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~~-L~~AD~vv-iV~~p~~~slr 312 (427)
T Consensus 634 ~~~~~l~~l~~GGas~~~h~~~eLLaspa~~~l~~~ar~~~D~vvvd~~~~~pV~d~~a~a~la~~~lslvt~~~r~~~~ 713 (778)
T TIGR01005 634 EVAAKLDILDAGGASLLRHNSSELLASPAMVELVENARSAYDLVVVDVAAVAPVADAKALAALADLVLSLVTEYDRSVVE 713 (778)
T ss_pred CCCCCCHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHCCCEEEHHEEEECCEEHH
T ss_conf 23677112334761247888415321668899999886518857745531248999999742242002001111441044
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCC
Q ss_conf 9999999999819876753899956589875
Q gi|254780725|r 313 NSKNLIDVLKKLRPADKPPYLVLNQVKTPKK 343 (427)
Q Consensus 313 ~a~~ll~~l~~~~~~~~~~~iVlNr~~~~~~ 343 (427)
T Consensus 714 ~~r~~~~~~~~~n~--~v~gV~ln~ldpn~~ 742 (778)
T TIGR01005 714 LVRELLKSLSRLNS--EVLGVVLNKLDPNEL 742 (778)
T ss_pred HHHHHHHHHHHCCC--EEEEEEECCCCCCCH
T ss_conf 42887754453186--045665045575201