HHsearch alignment for GI: 254780725 and conserved domain: TIGR01969
>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites. In Escherichia coli, selection of the correct mid-cell site is mediated by the MinC, MinD and MinE proteins. Several members of this family are found in archaeal genomes but their function is uncharacterised. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. This entry represents the archaeal MinD family. The exact roles of the various archaeal MinD homologs are unknown. .
Probab=100.00 E-value=0 Score=301.37 Aligned_cols=231 Identities=19% Similarity=0.259 Sum_probs=216.1
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCC-CCCCHHHHHCCCCCHHHHHHHHHHHCC
Q ss_conf 3799974698877568999999999962699499997879898603343899-878988863184561243376532024
Q gi|254780725|r 162 CSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKD-PINSISDAIYPVGRIDKAFVSRLPVFY 240 (427)
Q Consensus 162 rvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~-~~~~l~d~l~~~~rlD~~~l~~~l~~~ 240 (427)
T Consensus 1 r~I~iASGKGGtGKTT~tANLgVALA~-~Gk~V~~~DADI~MANL~LiLgmE~~~VTLhDVLAGeA~-----i~DAIY~g 74 (258)
T TIGR01969 1 RIITIASGKGGTGKTTITANLGVALAK-LGKKVLVLDADITMANLELILGMEDKPVTLHDVLAGEAD-----IKDAIYEG 74 (258)
T ss_pred CEEEEEECCCCCCHHHEEEHHHHHHHH-CCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCC-----HHHHCCCC
T ss_conf 988999778898614000007788986-097689994676677689884468889675221344561-----00110028
Q ss_pred CCC-EEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 898-0687248761203207999999989998512888997388888989999986201254357877688999999999
Q gi|254780725|r 241 AEN-LSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKNLID 319 (427)
Q Consensus 241 ~~g-L~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~ 319 (427)
T Consensus 75 p~GnV~V~PagvSLEg~rKA~~~~L~dV~~~i~~~~D~lLIDAPAGL~~~a~~Al~~a~elLLVvNPEi~SItDaLK~k~ 154 (258)
T TIGR01969 75 PEGNVKVIPAGVSLEGLRKADPDKLEDVLKEIIDDTDFLLIDAPAGLERDAVTALAAADELLLVVNPEISSITDALKVKI 154 (258)
T ss_pred CCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 89844785061221000126833328999987204377887478983378999998618664866765446777889999
Q ss_pred HHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 99981987675389995658987520059999998489537990687999999884796189888999899999999999
Q gi|254780725|r 320 VLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDGAVFGMSANSGKMIHEVDPKSAIANLLVDFSRV 399 (427)
Q Consensus 320 ~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~~~~~~A~~~G~pi~e~~p~s~~a~~~~~La~~ 399 (427)
T Consensus 155 va~~lG--t~ilG~vlNRv~~~-~tel~~~eiE~iLevPVl~~vPEDP~V-R~AAa~G~P~V~~~P~SpAA~A~~eLA~~ 230 (258)
T TIGR01969 155 VAEKLG--TAILGVVLNRVTRD-KTELGREEIEAILEVPVLGVVPEDPEV-RRAAAFGEPVVVYSPNSPAAQAFMELAAE 230 (258)
T ss_pred HHHHCC--CCEEEEEEEECCCC-CCCCCHHHHHHHHCCCEEEEECCCHHH-HHHHHCCCCEEEECCCCHHHHHHHHHHHH
T ss_conf 987608--83246899602366-663788899988479738985698434-45642485368847998789999999999
Q ss_pred HHC
Q ss_conf 852
Q gi|254780725|r 400 LMG 402 (427)
Q Consensus 400 i~g 402 (427)
T Consensus 231 l~G 233 (258)
T TIGR01969 231 LAG 233 (258)
T ss_pred HHC
T ss_conf 718