HHsearch alignment for GI: 254780725 and conserved domain: TIGR03371
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PMID:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=100.00 E-value=3.1e-40 Score=266.55 Aligned_cols=234 Identities=18% Similarity=0.193 Sum_probs=190.8
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCC--CCCHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 37999746988775689999999999626994999978798986033438998--7898886318456124337653202
Q gi|254780725|r 162 CSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDP--INSISDAIYPVGRIDKAFVSRLPVF 239 (427)
Q Consensus 162 rvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~--~~~l~d~l~~~~rlD~~~l~~~l~~ 239 (427)
T Consensus 2 kiIav~n~KGGVGKTT~avNLA~~La~-~G~rVLlIDlDpQ-~~l~~~~g~~~~~~~~l~~~~~~~~~-----~~~~~~~ 74 (246)
T TIGR03371 2 KVIAIVGIKGGVGRTTLTAALASALKL-LGEPVLAIDLDPQ-NLLRLHFGMDWSVRDGWARALLAGED-----WRAAAYR 74 (246)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCC-CCHHHHCCCCCCCCCCHHHHHHCCCC-----HHHHHEE
T ss_conf 399997599985499999999999996-8997899975999-85032248887534569999827998-----8895255
Q ss_pred CCCCEEEEECCCC-CC---CHHCCCHHHHHHHHHHHH-HCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 4898068724876-12---032079999999899985-128889973888889899999862012543578776889999
Q gi|254780725|r 240 YAENLSILTAPAM-LS---RTYDFDEKMIVPVLDILE-QIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNS 314 (427)
Q Consensus 240 ~~~gL~lL~a~~~-~~---~~~~~~~~~l~~ll~~l~-~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a 314 (427)
T Consensus 75 ~~~~~~~ip~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~D~viiD~pp~l~~~~~~al~aad~vlipv~~~~~s~~~~ 154 (246)
T TIGR03371 75 SSDGVLFLPYGTLSADEREAYQAHDAGWLARLLQQLDLAARDWVLIDLPRGPSPITDQALAAADLVLVVVNADAACYATL 154 (246)
T ss_pred CCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHH
T ss_conf 78982897089847778987604478999999986303679889994899874999999998894799818998999999
Q ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCCCHH-HHHHHHHHHCCCEE-EEECCCHHHHHHHHHCCCCEEEECCCCHHHHH
Q ss_conf 99999999819876753899956589875200-59999998489537-99068799999988479618988899989999
Q gi|254780725|r 315 KNLIDVLKKLRPADKPPYLVLNQVKTPKKPEI-SISDFCAPLGITPS-AIIPFDGAVFGMSANSGKMIHEVDPKSAIANL 392 (427)
Q Consensus 315 ~~ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i-~~~~~~~~lg~~~~-~~IP~D~~~~~~A~~~G~pi~e~~p~s~~a~~ 392 (427)
T Consensus 155 ~~~~~~~~~~~~~~~~~~iv~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~I~~~~~-v~eA~~~g~pv~~~~p~S~aa~~ 233 (246)
T TIGR03371 155 HQLALALLARSVPPDGIHYLINQFQPARQLSRDVRAVLRATLGSRLLPMFVHRDEA-VAEALARGTPVFNYAPHSQAAHD 233 (246)
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHH-HHHHHHCCCCCEEECCCCHHHHH
T ss_conf 99999999842776751788630264015899999999997498816226899779-99999769982669958989999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999998522
Q gi|254780725|r 393 LVDFSRVLMGR 403 (427)
Q Consensus 393 ~~~La~~i~gr 403 (427)
T Consensus 234 y~~LA~~ll~~ 244 (246)
T TIGR03371 234 IRTLAFWLLTK 244 (246)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999996