HHsearch alignment for GI: 254780725 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=91.41 E-value=0.29 Score=26.94 Aligned_cols=37 Identities=27% Similarity=0.251 Sum_probs=26.9
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 6753799974698877568999999999962699499997
Q gi|254780725|r 159 SSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLAD 198 (427)
Q Consensus 159 ~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvD 198 (427)
T Consensus 489 ~~Ge~vaIvG-~sGsGKSTL~kll~Gl~~p~~-G~-i~id 525 (694)
T TIGR03375 489 RPGEKVAIIG-RIGSGKSTLLKLLLGLYQPTE-GS-VLLD 525 (694)
T ss_pred CCCCEEEEEE-CCCCCHHHHHHHHCCCCCCCC-CE-EEEC
T ss_conf 7997899980-589878899998556758998-87-9989