HHsearch alignment for GI: 254780725 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=93.53 E-value=0.16 Score=28.49 Aligned_cols=38 Identities=24% Similarity=0.321 Sum_probs=30.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 9997469887756899999999996269949999787989
Q gi|254780725|r 164 ISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPY 203 (427)
Q Consensus 164 Iav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~ 203 (427)
T Consensus 2 ~li~-g~~g~GKttl~~~~~~~~~~-~~~~~~~~~~ee~~ 39 (165)
T cd01120 2 ILVF-GPTGSGKTTLALQLALNIAT-KGGKVVYVDIEEEI 39 (165)
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHH-CCCEEEEEECCCCH
T ss_conf 8999-89999899999999999876-39979999866644