HHsearch alignment for GI: 254780725 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=93.47 E-value=0.23 Score=27.61 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=43.7
Q ss_pred CCCEEEECCCCCC---------C----HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 2888997388888---------9----89999986201254357877688999999999999819876753899956589
Q gi|254780725|r 274 IFPLVILDVPHVW---------N----SWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKT 340 (427)
Q Consensus 274 ~yd~VIiD~p~~~---------~----~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~ 340 (427)
T Consensus 49 ~~~~~~vDtpGi~~~~~~~~~~e~~~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~---~p~iiv~NK~Dl 125 (174)
T cd01895 49 GKKYTLIDTAGIRRKGKVEEGIEKYSVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEG---KALVIVVNKWDL 125 (174)
T ss_pred CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCC---CCEEEEEECEEC
T ss_conf 98899985788421344210688999999999998428658997589899889999999999859---986999856752
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 875200599999984
Q gi|254780725|r 341 PKKPEISISDFCAPL 355 (427)
Q Consensus 341 ~~~~~i~~~~~~~~l 355 (427)
T Consensus 126 i~~~~~~~~~~~~~~ 140 (174)
T cd01895 126 VEKDSKTMKEFKKEI 140 (174)
T ss_pred CCCCHHHHHHHHHHH
T ss_conf 676477899999999