HHsearch alignment for GI: 254780725 and conserved domain: cd01895

>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=93.47  E-value=0.23  Score=27.61  Aligned_cols=79  Identities=11%  Similarity=0.127  Sum_probs=43.7

Q ss_pred             CCCEEEECCCCCC---------C----HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             2888997388888---------9----89999986201254357877688999999999999819876753899956589
Q gi|254780725|r  274 IFPLVILDVPHVW---------N----SWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKT  340 (427)
Q Consensus       274 ~yd~VIiD~p~~~---------~----~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~  340 (427)
T Consensus        49 ~~~~~~vDtpGi~~~~~~~~~~e~~~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~---~p~iiv~NK~Dl  125 (174)
T cd01895          49 GKKYTLIDTAGIRRKGKVEEGIEKYSVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEG---KALVIVVNKWDL  125 (174)
T ss_pred             CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCC---CCEEEEEECEEC
T ss_conf             98899985788421344210688999999999998428658997589899889999999999859---986999856752


Q ss_pred             CCCCHHHHHHHHHHH
Q ss_conf             875200599999984
Q gi|254780725|r  341 PKKPEISISDFCAPL  355 (427)
Q Consensus       341 ~~~~~i~~~~~~~~l  355 (427)
T Consensus       126 i~~~~~~~~~~~~~~  140 (174)
T cd01895         126 VEKDSKTMKEFKKEI  140 (174)
T ss_pred             CCCCHHHHHHHHHHH
T ss_conf             676477899999999