HHsearch alignment for GI: 254780725 and conserved domain: cd02037
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=99.90 E-value=1.2e-22 Score=158.38 Aligned_cols=157 Identities=25% Similarity=0.276 Sum_probs=121.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCC
Q ss_conf 79997469887756899999999996269949999787989860334389987898886318456124337653202489
Q gi|254780725|r 163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYAE 242 (427)
Q Consensus 163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~~~~ 242 (427)
T Consensus 1 vi~v~s~kggvgkst~~~~la~~l~~-~g~~v~~~d~di~gpsip~~~------------r------------------- 48 (169)
T cd02037 1 VIAVMSGKGGVGKSTVAVNLALALAK-LGYKVGLLDADIYGPSIPKMW------------R------------------- 48 (169)
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCCCEEE------------E-------------------
T ss_conf 98997499988199999999999998-799789997137999755012------------0-------------------
Q ss_pred CEEEEECCCCCCCHHCCCHHHHHHHH-HHHHHCCCEEEECCCCCCCHHHHHHH--HHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 80687248761203207999999989-99851288899738888898999998--6201254357877688999999999
Q gi|254780725|r 243 NLSILTAPAMLSRTYDFDEKMIVPVL-DILEQIFPLVILDVPHVWNSWTQEVL--TLSDKVVITTSLDLAGLRNSKNLID 319 (427)
Q Consensus 243 gL~lL~a~~~~~~~~~~~~~~l~~ll-~~l~~~yd~VIiD~p~~~~~~~~~~L--~~AD~vviV~~p~~~slr~a~~ll~ 319 (427)
T Consensus 49 ------Gp--------~~~~~i~q~l~~~~w~~lDyLIID~PPGtgD~~lt~~~~~~~d~~IvVTTP~~~s~~Da~r~i~ 114 (169)
T cd02037 49 ------GP--------MKMGAIKQFLTDVDWGELDYLVIDMPPGTGDEHLTLAQSLPIDGAVIVTTPQEVALDDVRKAID 114 (169)
T ss_pred ------CH--------HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf ------47--------3899999999852546678899968999870778798750567479994695889999999999
Q ss_pred HHHHCCCCCCCCEEEEECCCC--C---CC----CHHHHHHHHHHHCCCEEEEECCCH
Q ss_conf 999819876753899956589--8---75----200599999984895379906879
Q gi|254780725|r 320 VLKKLRPADKPPYLVLNQVKT--P---KK----PEISISDFCAPLGITPSAIIPFDG 367 (427)
Q Consensus 320 ~l~~~~~~~~~~~iVlNr~~~--~---~~----~~i~~~~~~~~lg~~~~~~IP~D~ 367 (427)
T Consensus 115 ~~~~~~i--~i~GvVeNMs~~~c~~c~~~~~ifg~~~~~~la~~~~i~~Lg~IP~dp 169 (169)
T cd02037 115 MFKKVNI--PILGVVENMSYFVCPHCGKKIYIFGKGGGEKLAEELGVPLLGKIPLDP 169 (169)
T ss_pred HHHHCCC--CEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 9997599--707999879666079999735278884499999995999898728999