HHsearch alignment for GI: 254780725 and conserved domain: cd03114

>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=97.29  E-value=0.0063  Score=37.18  Aligned_cols=146  Identities=14%  Similarity=0.170  Sum_probs=82.2

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCC
Q ss_conf             799974698877568999999999962699499997879898-6033438998789888631845612433765320248
Q gi|254780725|r  163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYG-TANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYA  241 (427)
Q Consensus       163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g-~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~~~  241 (427)
T Consensus         1 viGitG-~pGaGKStLi~~l~~~~~~-~g~~VaVlavDPsS~~sgGalLG--------DRi----Rm~~~-------~~~   59 (148)
T cd03114           1 VIGITG-VPGAGKSTLIDALITALRA-RGKRVAVLAIDPSSPFSGGAILG--------DRI----RMERH-------ASD   59 (148)
T ss_pred             CEEECC-CCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCCHH--------HHH----HHHHH-------CCC
T ss_conf             976258-9978789999999999997-89837999968887866862032--------354----53441-------579


Q ss_pred             CCEEEEECCCCCCCHHCCCHHHHHHHHHHHH-HCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             9806872487612032079999999899985-128889973888889899999862012543578776889999999999
Q gi|254780725|r  242 ENLSILTAPAMLSRTYDFDEKMIVPVLDILE-QIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDV  320 (427)
Q Consensus       242 ~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~-~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~  320 (427)
T Consensus        60 ~~vfiRs~atrg~-~ggl-a~~~~~~i~~l~~~g~D~IiIETvG-vGQse~~i~~~aD~~i~v~~p~~GD~iQ~~-----  131 (148)
T cd03114          60 PGVFIRSLATRGF-LGGL-SRATPEVIRVLDAAGFDVIIVETVG-VGQSEVDIASMADTTVVVMAPGAGDDIQAI-----  131 (148)
T ss_pred             CCEEEEECCCCCC-CCCH-HHHHHHHHHHHHHCCCCEEEEECCC-CCCCHHHHHHHCCEEEEEECCCCCCHHHHC-----
T ss_conf             9836863466665-4204-6889999999997599989997487-775602655435669999636887377611-----


Q ss_pred             HHHCCCCCCCCEEEEECCC
Q ss_conf             9981987675389995658
Q gi|254780725|r  321 LKKLRPADKPPYLVLNQVK  339 (427)
Q Consensus       321 l~~~~~~~~~~~iVlNr~~  339 (427)
T Consensus       132 -K~-gi~e~aDl~vvNK~D  148 (148)
T cd03114         132 -KA-GIMEIADIVVVNKAD  148 (148)
T ss_pred             -CC-CHHHCCCEEEEECCC
T ss_conf             -22-852124699993789