HHsearch alignment for GI: 254780725 and conserved domain: cd03114
>cd03114 ArgK-like The function of this protein family is unkown. The protein sequences are similar to the ArgK protein in E. coli. ArgK protein is a membrane ATPase which is required for transporting arginine, ornithine and lysine into the cells by the arginine and ornithine (AO system) and lysine, arginine and ornithine (LAO) transport systems.
Probab=97.29 E-value=0.0063 Score=37.18 Aligned_cols=146 Identities=14% Similarity=0.170 Sum_probs=82.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-CCHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCC
Q ss_conf 799974698877568999999999962699499997879898-6033438998789888631845612433765320248
Q gi|254780725|r 163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYG-TANINFDKDPINSISDAIYPVGRIDKAFVSRLPVFYA 241 (427)
Q Consensus 163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g-~~~~~l~~~~~~~l~d~l~~~~rlD~~~l~~~l~~~~ 241 (427)
T Consensus 1 viGitG-~pGaGKStLi~~l~~~~~~-~g~~VaVlavDPsS~~sgGalLG--------DRi----Rm~~~-------~~~ 59 (148)
T cd03114 1 VIGITG-VPGAGKSTLIDALITALRA-RGKRVAVLAIDPSSPFSGGAILG--------DRI----RMERH-------ASD 59 (148)
T ss_pred CEEECC-CCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCCHH--------HHH----HHHHH-------CCC
T ss_conf 976258-9978789999999999997-89837999968887866862032--------354----53441-------579
Q ss_pred CCEEEEECCCCCCCHHCCCHHHHHHHHHHHH-HCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9806872487612032079999999899985-128889973888889899999862012543578776889999999999
Q gi|254780725|r 242 ENLSILTAPAMLSRTYDFDEKMIVPVLDILE-QIFPLVILDVPHVWNSWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDV 320 (427)
Q Consensus 242 ~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~-~~yd~VIiD~p~~~~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~ 320 (427)
T Consensus 60 ~~vfiRs~atrg~-~ggl-a~~~~~~i~~l~~~g~D~IiIETvG-vGQse~~i~~~aD~~i~v~~p~~GD~iQ~~----- 131 (148)
T cd03114 60 PGVFIRSLATRGF-LGGL-SRATPEVIRVLDAAGFDVIIVETVG-VGQSEVDIASMADTTVVVMAPGAGDDIQAI----- 131 (148)
T ss_pred CCEEEEECCCCCC-CCCH-HHHHHHHHHHHHHCCCCEEEEECCC-CCCCHHHHHHHCCEEEEEECCCCCCHHHHC-----
T ss_conf 9836863466665-4204-6889999999997599989997487-775602655435669999636887377611-----
Q ss_pred HHHCCCCCCCCEEEEECCC
Q ss_conf 9981987675389995658
Q gi|254780725|r 321 LKKLRPADKPPYLVLNQVK 339 (427)
Q Consensus 321 l~~~~~~~~~~~iVlNr~~ 339 (427)
T Consensus 132 -K~-gi~e~aDl~vvNK~D 148 (148)
T cd03114 132 -KA-GIMEIADIVVVNKAD 148 (148)
T ss_pred -CC-CHHHCCCEEEEECCC
T ss_conf -22-852124699993789