>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=94.04  E-value=0.19  Score=28.11  Aligned_cols=28  Identities=25%  Similarity=0.268  Sum_probs=22.5

Q ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             56753799974698877568999999999
Q gi|254780725|r  158 GSSGCSISFIGSRGGVGSSTIAHNCAFSI  186 (427)
Q Consensus       158 ~~~grvIav~g~KGGvGkTTiA~nLA~~L  186 (427)
T Consensus        23 i~~Ge~~~ivG-pSG~GKSTllr~i~Gl~   50 (178)
T cd03229          23 IEAGEIVALLG-PSGSGKSTLLRCIAGLE   50 (178)
T ss_pred             ECCCCEEEEEC-CCCCHHHHHHHHHHCCC
T ss_conf             88998999999-99983999999998599