HHsearch alignment for GI: 254780725 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=94.69 E-value=0.069 Score=30.79 Aligned_cols=38 Identities=29% Similarity=0.322 Sum_probs=26.6
Q ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 6753799974698877568999999999962699499997
Q gi|254780725|r 159 SSGCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLAD 198 (427)
Q Consensus 159 ~~grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvD 198 (427)
T Consensus 28 ~~G~~v~ivG-~sGsGKSTLl~ll~gl~~p~-~G~I~i~g 65 (220)
T cd03245 28 RAGEKVAIIG-RVGSGKSTLLKLLAGLYKPT-SGSVLLDG 65 (220)
T ss_pred CCCCEEEEEC-CCCCHHHHHHHHHHCCCCCC-CCEEEECC
T ss_conf 7999999999-99985999999996725478-65899999