HHsearch alignment for GI: 254780725 and conserved domain: cd04167

>cd04167 Snu114p Snu114p subfamily. Snu114p is one of several proteins that make up the U5 small nuclear ribonucleoprotein (snRNP) particle. U5 is a component of the spliceosome, which catalyzes the splicing of pre-mRNA to remove introns. Snu114p is homologous to EF-2, but typically contains an additional N-terminal domain not found in Ef-2. This protein is part of the GTP translation factor family and the Ras superfamily, characterized by five G-box motifs.
Probab=96.39  E-value=0.056  Score=31.35  Aligned_cols=64  Identities=25%  Similarity=0.247  Sum_probs=50.9

Q ss_pred             CCCEEEECCCCCC--CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             2888997388888--989999986201254357877688999999999999819876753899956589
Q gi|254780725|r  274 IFPLVILDVPHVW--NSWTQEVLTLSDKVVITTSLDLAGLRNSKNLIDVLKKLRPADKPPYLVLNQVKT  340 (427)
Q Consensus       274 ~yd~VIiD~p~~~--~~~~~~~L~~AD~vviV~~p~~~slr~a~~ll~~l~~~~~~~~~~~iVlNr~~~  340 (427)
T Consensus        70 ~~~inlIDTPGH~dF~~ev~~al~~~DgailVVDa~eGv~~qT~~~l~~a~~~~l---~~ilviNKiDR  135 (213)
T cd04167          70 SYLFNIIDTPGHVNFMDEVAAALRLSDGVVLVVDVVEGVTSNTERLIRHAILEGL---PIVLVINKIDR  135 (213)
T ss_pred             EEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCC---CEEEEEECCCC
T ss_conf             0578778898724179999988863776799998788875779999999998699---98999988234