HHsearch alignment for GI: 254780725 and conserved domain: pfam00072
>pfam00072 Response_reg Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.
Probab=99.39 E-value=2e-11 Score=89.38 Aligned_cols=106 Identities=14% Similarity=0.217 Sum_probs=89.3
Q ss_pred ECCHHHHHHHHHHHHHHHHHHCEEE-EECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 3898999999988641100202237-306998999999861899849999805987677889998885328998089981
Q gi|254780725|r 35 CVTDTLYSVVERSKIDPRMSQVNMR-ITRGSIAEAVSCFSDSSTPDLIIVQTKVDSREVLSALEPLAEVCDSGTKVIVIG 113 (427)
Q Consensus 35 ~~~~~~~~~~~~~~~drr~~~~~~~-v~~g~~~~A~~~~~~~~~P~~iivd~~~~~~~~~~~l~~la~~~~p~~~Vivig 113 (427)
T Consensus 5 DD~~~~~~~l~~~L~~-----~g~~v~~a~~g~~al~~~~~~-~~dlvi~Di~mP~~dG~el~~~ir~~-~~~~piI~~T 77 (111)
T pfam00072 5 DDDPLIRELLRQLLEK-----EGYVVAEADDGEEALELLKEK-RPDLILLDIRMPGMDGLELLRRIRRR-PPTTPVIVLT 77 (111)
T ss_pred ECCHHHHHHHHHHHHH-----CCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHHC-CCCCEEEEEE
T ss_conf 8989999999999998-----899999989999999999847-99899995368995015799999735-9998099997
Q ss_pred CCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
Q ss_conf 6871899999997656264318999899999763
Q gi|254780725|r 114 DTNDVSLYRALISNHVSEYLIEPLSVADIINSIS 147 (427)
Q Consensus 114 ~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~ 147 (427)
T Consensus 78 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~ir 111 (111)
T pfam00072 78 AHGDEEDAVEALKAGANDFLSKPFDPEELVAALR 111 (111)
T ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHCC
T ss_conf 5089999999997798779949999899998529