HHsearch alignment for GI: 254780725 and conserved domain: pfam00485
>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=94.16 E-value=0.048 Score=31.72 Aligned_cols=185 Identities=12% Similarity=0.056 Sum_probs=78.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCC----CHHHH-HCCCCCHHHHHHHHHH
Q ss_conf 799974698877568999999999962699499997879898603343899878----98886-3184561243376532
Q gi|254780725|r 163 SISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPYGTANINFDKDPIN----SISDA-IYPVGRIDKAFVSRLP 237 (427)
Q Consensus 163 vIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~g~~~~~l~~~~~~----~l~d~-l~~~~rlD~~~l~~~l 237 (427)
T Consensus 1 iIgIaG-~SgSGKTT~a~~L~~~l~~-~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d~~ll~~~l 78 (196)
T pfam00485 1 IIGVAG-SSGAGKTTVARTFVSIFGR-EGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEANDFDLLYEQF 78 (196)
T ss_pred CEEEEC-CCCCCHHHHHHHHHHHHCC-CCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 989989-9857199999999999660-58776412431798604102443757676514578897896623599999999
Q ss_pred HCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCC-HHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf 02489806872487612032079999999899985128889973888889-89999986201254357877688999999
Q gi|254780725|r 238 VFYAENLSILTAPAMLSRTYDFDEKMIVPVLDILEQIFPLVILDVPHVWN-SWTQEVLTLSDKVVITTSLDLAGLRNSKN 316 (427)
Q Consensus 238 ~~~~~gL~lL~a~~~~~~~~~~~~~~l~~ll~~l~~~yd~VIiD~p~~~~-~~~~~~L~~AD~vviV~~p~~~slr~a~~ 316 (427)
T Consensus 79 ~~Lk~g~~i~~------P~Ydf~~~~r~~~~~~i-~p~~viIvEGi~~l~~~~ir~l~D--~kIfid~~~d---~rl~RR 146 (196)
T pfam00485 79 KELKEGGSGDK------PIYNHVTGEADPWPELI-EGADILFIEGLHGLYDERVAQLLD--LKIYVDPDID---LELIQK 146 (196)
T ss_pred HHHHCCCCEEE------EEEECCCCCCCCCCEEC-CCCCEEEEECHHHCCCHHHHHHHC--EEEEEECCCC---HHHHHH
T ss_conf 99708994576------56751345336773661-788569994333303277887638--4799726801---999999
Q ss_pred HHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCCH
Q ss_conf 999999819876753899956589875200599999984895379906879
Q gi|254780725|r 317 LIDVLKKLRPADKPPYLVLNQVKTPKKPEISISDFCAPLGITPSAIIPFDG 367 (427)
Q Consensus 317 ll~~l~~~~~~~~~~~iVlNr~~~~~~~~i~~~~~~~~lg~~~~~~IP~D~ 367 (427)
T Consensus 147 i~RD~~eRgrs---~~~v~~q~~~-v~--p~~~~fI~P~k~~ADliI~~~p 191 (196)
T pfam00485 147 IQRDMAERGHS---LEGVTDSIER-RK--PDYVNYICPQFSYADLIIQRVP 191 (196)
T ss_pred HHHCHHHHCCC---HHHHHHHHHH-HH--HHHHHHCCCCHHHCCEEECCCC
T ss_conf 87345751999---9999999999-72--5389647478522988970699