HHsearch alignment for GI: 254780725 and conserved domain: pfam07279
>pfam07279 DUF1442 Protein of unknown function (DUF1442). This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=90.19 E-value=1.3 Score=22.88 Aligned_cols=73 Identities=12% Similarity=0.093 Sum_probs=48.7
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99816871899999997656264318999899999763102332223456753799974698877568999999999962
Q gi|254780725|r 110 IVIGDTNDVSLYRALISNHVSEYLIEPLSVADIINSISAIFTPQEEGKGSSGCSISFIGSRGGVGSSTIAHNCAFSIASV 189 (427)
Q Consensus 110 ivig~~~d~~l~r~l~r~Gv~dyl~~P~~~~~l~~ai~~~~~~~~~~~~~~grvIav~g~KGGvGkTTiA~nLA~~LA~~ 189 (427)
T Consensus 3 lvWSpE~A~KAYl~Tvk~~~~~---~ep~vaEfiSAlA---------AG~nAkLiVe~~s~~~~~~tsiaLaaAA---~~ 67 (218)
T pfam07279 3 LVWSPETASKAYIDTVKSCENL---GTPGAAELLAAMA---------AGWNARLIVETWSEGDPIATSVGLNVAS---RH 67 (218)
T ss_pred CEECHHHHHHHHHHHHHHCCCC---CCCCHHHHHHHHH---------CCCCCEEEEEEECCCCCCHHHHHHHHHH---HH
T ss_conf 1567158899999999861245---8977899999985---------7666459999713788502589999998---74
Q ss_pred C-CCCEEEE
Q ss_conf 6-9949999
Q gi|254780725|r 190 F-AMETLLA 197 (427)
Q Consensus 190 ~-~~~VlLv 197 (427)
T Consensus 68 TgGR~VCIl 76 (218)
T pfam07279 68 TNGRHICIV 76 (218)
T ss_pred CCCEEEEEC
T ss_conf 398289983