HHsearch alignment for GI: 254780725 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=95.45 E-value=0.039 Score=32.29 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=32.0
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 5379997469887756899999999996269949999787989
Q gi|254780725|r 161 GCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPY 203 (427)
Q Consensus 161 grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~ 203 (427)
T Consensus 2 ~~~ill~G-~~GsGKTtl~~~la~~~~~~-~~~v~~~~~~~~~ 42 (148)
T smart00382 2 GEVILIVG-PPGSGKTTLARALARELGPP-GGGVIYIDGEDIL 42 (148)
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHHHCCC-CCCEEEEEHHHHH
T ss_conf 97899999-99702999999999872668-9968998759989