HHsearch alignment for GI: 254780725 and conserved domain: smart00382

>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=95.45  E-value=0.039  Score=32.29  Aligned_cols=41  Identities=22%  Similarity=0.237  Sum_probs=32.0

Q ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             5379997469887756899999999996269949999787989
Q gi|254780725|r  161 GCSISFIGSRGGVGSSTIAHNCAFSIASVFAMETLLADLDLPY  203 (427)
Q Consensus       161 grvIav~g~KGGvGkTTiA~nLA~~LA~~~~~~VlLvDlDl~~  203 (427)
T Consensus         2 ~~~ill~G-~~GsGKTtl~~~la~~~~~~-~~~v~~~~~~~~~   42 (148)
T smart00382        2 GEVILIVG-PPGSGKTTLARALARELGPP-GGGVIYIDGEDIL   42 (148)
T ss_pred             CCEEEEEC-CCCHHHHHHHHHHHHHHCCC-CCCEEEEEHHHHH
T ss_conf             97899999-99702999999999872668-9968998759989