HHsearch results for GI: 254780727 and protein with PDBid: 1f1s_A
>1f1s_A Hyaluronate lyase; the structure consists of three distinct structural domains: two beta domains at two terminals and one alpha domain in the middle of the sequence.; 2.10A {Streptococcus agalactiae} SCOP: a.102.3.2 b.1.18.2 b.24.1.1 b.30.5.2 PDB: 1i8q_A* 1lxm_A*
Probab=92.04 E-value=0.45 Score=23.23 Aligned_cols=65 Identities=17% Similarity=0.311 Sum_probs=54.2
Q ss_pred CCEEEEEECCEEEEECCCCHHHEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCC
Q ss_conf 402799507259995377633078537343799971698799995267227999988999778999873045
Q gi|254780727|r 47 GKKISIGLNKVIILQVPVDVQDVLVSDPTKADVVVHSPRTMYLFGKNVGQANVILIGHDGKQMLNLDILIER 118 (474)
Q Consensus 47 ~~~l~l~~g~s~~l~~~~~~~rV~V~dp~Vadv~v~s~~~i~i~gk~~G~T~l~v~~~~g~~~~~~~v~v~~ 118 (474)
-+.+.+++++-.+++.++ ..--+.||+|+.+. .-++++.++|.|++.+.+++|+.+..+.+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 76 (814)
T 1f1s_A 12 EKSVNTALNKNYVFNKAD--YQYTLTNPSLGKIV-----GGILYPNATGSTTVKISDKSGKIIKEVPLSVTA 76 (814)
T ss_dssp CSCEEEETTSCEECSSTT--SEEEESSGGGEEEE-----TTEEEECSCEEEEEEEECTTCCEEEEEEEEEEC
T ss_pred HHHEECCCCCEEEECCCC--EEEEECCCCHHEEE-----CCEEEECCCCEEEEEEECCCCCEEEEEEEEECC
T ss_conf 340423447656532664--26776386260121-----645871258807999985899789997636437