HHSEARCH alignment of GI: 254780727 and SCOP domain: d1f1sa2

Alignment

Probab=93.80  E-value=0.12  Score=25.20  Aligned_cols=67  Identities=16%  Similarity=0.299  Sum_probs=54.4

Q ss_pred             CCCCEEEEEECCEEEEECCCCHHHEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCC
Q ss_conf             65402799507259995377633078537343799971698799995267227999988999778999873045
Q gi|254780727|r   45 GKGKKISIGLNKVIILQVPVDVQDVLVSDPTKADVVVHSPRTMYLFGKNVGQANVILIGHDGKQMLNLDILIER  118 (474)
Q Consensus        45 ~~~~~l~l~~g~s~~l~~~~~~~rV~V~dp~Vadv~v~s~~~i~i~gk~~G~T~l~v~~~~g~~~~~~~v~v~~  118 (474)
                      +-.+.+++++|+-.++...+  ....|-||.|+.+.    +. ++...+.|.|++.+.|.+|+.+..+-+.+.+
T Consensus        10 ~lE~~i~lpL~K~yvf~~aD--Y~Y~iens~i~~V~----nG-il~Pl~eG~T~vkVsdkdGk~vk~iPl~v~a   76 (78)
T d1f1sa2          10 QIEKSVNTALNKNYVFNKAD--YQYTLTNPSLGKIV----GG-ILYPNATGSTTVKISDKSGKIIKEVPLSVTA   76 (78)
T ss_dssp             CCCSCEEEETTSCEECSSTT--SEEEESSGGGEEEE----TT-EEEECSCEEEEEEEECTTCCEEEEEEEEEEC
T ss_pred             HHHHHHCCCCCCEEEEEECC--EEEEECCCCEEEEE----CC-EEEECCCCCEEEEEECCCCCEEEEEEEEEEE
T ss_conf             57776134456102765031--58896078624663----42-5777336845899863589699997248870

SCOP domain information

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Hyaluronate lyase precatalytic domain
species: Streptococcus agalactiae [TaxId: 1311]